ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3757_15

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(11825..12598)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B760E5 similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 256.0
  • Bit_score: 314
  • Evalue 1.00e-82
  • rbh
Membrane protein {ECO:0000313|EMBL:EZH73280.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.2
  • Coverage: 255.0
  • Bit_score: 272
  • Evalue 4.80e-70
hypothetical membrane protein similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 257.0
  • Bit_score: 242
  • Evalue 1.20e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Aquimarina atlantica → Aquimarina → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 774
GTGCTGCAGGCCGCGGCGACGGGCTGGTTCGTGGTGGCCGGACTGGGCCAGCTGATCTTCGTCGCGTACCTGTTCGGCTTTTACGGCCGCACCGCGCTGCTCGGCCAATTCGACGCCTGGAACCGGATCTTTCCACGCGCCCACGTGGCGGGAGATCCGCTGCACAACGCCGCGGTGGCCGCGCACCTGGCTTTCGCGGCGCTGATCACCATCGGCGGCCTGCTTCAGTTGGCGACGGGCGTGCGGCGGCGGTTCCCGCGTTTCCATCGCTGGAACGGACGCATCTATCTCGCCTCGGCGTTCGTGATGGGCGTGGGTGGCCTGGCGATGGTATGGACGGGAACCAAGGTGGGCGGCCCGTGGCAGCACGTCGCGATCAGCATCAACGCGATCCTGATCCTGTTGTGCGCGGCGATGGCCTTGCGCCACGCCATGGACCGTCGCTTCGCACTGCATCGGCGCTGGGCGCTGCGCCTGTTCCTGGCGGTGAGCGGCGTGTGGTTCTTCCGCATCGGCCTGACGTTCTGGATATTGCTGAACCAGGGGCCGGCGGGTTTCGACCCGGAGACGTTCACCGGGCCGGCGCTCACCACCCTCGCGTTCGCCCAGTACCTGCTGCCGCTGGCCGTGCTCCAGCTCTACTTCCACGCGCAGGACCGAGGCGGGTCGCGCGGACGCACGGCCATGGCCGCGAGCCTGTTTGCCGCGACGCTGCTGACGGCGGCCGGCATCTTCGCCGCGTCGATGATGCTGTGGCTGCCGCATCTGCGGTAG
PROTEIN sequence
Length: 258
VLQAAATGWFVVAGLGQLIFVAYLFGFYGRTALLGQFDAWNRIFPRAHVAGDPLHNAAVAAHLAFAALITIGGLLQLATGVRRRFPRFHRWNGRIYLASAFVMGVGGLAMVWTGTKVGGPWQHVAISINAILILLCAAMALRHAMDRRFALHRRWALRLFLAVSGVWFFRIGLTFWILLNQGPAGFDPETFTGPALTTLAFAQYLLPLAVLQLYFHAQDRGGSRGRTAMAASLFAATLLTAAGIFAASMMLWLPHLR*