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SCNpilot_expt_1000_bf_scaffold_5536_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 650..886

Top 3 Functional Annotations

Value Algorithm Source
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 78.0
  • Bit_score: 152
  • Evalue 2.20e-34
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18) similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 78.0
  • Bit_score: 137
  • Evalue 1.70e-30
Succinyl-diaminopimelate desuccinylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU31_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 78.0
  • Bit_score: 152
  • Evalue 1.60e-34

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
TTGCGCGAAACCGTGGTGGCAGTCTGCCGCGAGCTGTGCGGCATCGATCCCGAACAGAGCACCGGCGGCGGCACCTCGGACGGCCGCTTCATTGCCCCGATGGGTGCCGAAGTTGTCGAGCTCGGCCCGGTCAACGCCACCATCCACAAGGTGGACGAGTGCGTGGACGTGGCGGAGCTGGAGAAACTGCCGGCGGTGTATCGGGCGTTGTGCGAGCGGTTGCTGGCCGGGGCCTGA
PROTEIN sequence
Length: 79
LRETVVAVCRELCGIDPEQSTGGGTSDGRFIAPMGAEVVELGPVNATIHKVDECVDVAELEKLPAVYRALCERLLAGA*