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SCNpilot_expt_1000_bf_scaffold_1333_4

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(2880..3644)

Top 3 Functional Annotations

Value Algorithm Source
Glutamine transport ATP-binding protein GlnQ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C690_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 254.0
  • Bit_score: 466
  • Evalue 1.60e-128
  • rbh
Glutamine transport ATP-binding protein GlnQ {ECO:0000313|EMBL:EYR77406.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 254.0
  • Bit_score: 466
  • Evalue 2.20e-128
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 254.0
  • Bit_score: 394
  • Evalue 2.40e-107

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGAACGATATCCGTCCGATGATCGAGGTGCGCGGCGCCCAAAAATTCTTCGGGCCGCTGGAGGTGCTGAAAGGCATCGATTTCAGCGTGGCGCGCGGTCAGATCGTTGCCGTCATCGGCCCCAGCGGTTCCGGCAAGAGCACGCTGCTGCGCTCGCTCAACCATCTGGAAACGCTTGATGGCGGCGAAGTCTGGCTCGATGGCGTCAAGGTCAACCAGACGCTCGGCCGCCGCGCCTTCGAGCGCCACATCAATGGCGTACGCCAGCAGATGGGCATGGTGTTCCAGCATTTTAACCTTTTTCCGCATCTGAGCGTCTCGGAAAACATCACCATCGCCCCGATCAGGCTGAAGGGCATGGCCAGGGCCGAAGCGCGGGCGCTCGCCCTGAAAATGCTCGACAAGGTGGGCCTCGCCGACAAGATCGACGCCGTTCCGGCGCGGCTCTCGGGCGGCCAGAAGCAGCGCGTGGCGATTGCCCGGGCGCTCGCCATGCAGCCCAAGGTCATGCTGTTCGACGAGGCGACCTCGGCGCTCGATCCGGAGCTGGTGGACGAGGTCAACCTGGTCATGAAGCAGCTTGCCGGCGAACACATGACCATGGTCATCGTCACCCATGAGATGCGGTTCGCCGCCGAAGTCGCCGACCGGGTGATCTTCATGGCGGATGGCGCCGTCGTGGAAGAGGGCAGCCCGGCCGAACTCTTCCGCAATCCGAAACAGGAGCGCACCCGCAGCTTCCTGAAGAAATTCCTCAACGGCTAG
PROTEIN sequence
Length: 255
MNDIRPMIEVRGAQKFFGPLEVLKGIDFSVARGQIVAVIGPSGSGKSTLLRSLNHLETLDGGEVWLDGVKVNQTLGRRAFERHINGVRQQMGMVFQHFNLFPHLSVSENITIAPIRLKGMARAEARALALKMLDKVGLADKIDAVPARLSGGQKQRVAIARALAMQPKVMLFDEATSALDPELVDEVNLVMKQLAGEHMTMVIVTHEMRFAAEVADRVIFMADGAVVEEGSPAELFRNPKQERTRSFLKKFLNG*