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SCNpilot_expt_1000_bf_scaffold_1333_7

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(5024..5809)

Top 3 Functional Annotations

Value Algorithm Source
Cystine-binding periplasmic protein FliY n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRH1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 261.0
  • Bit_score: 483
  • Evalue 1.70e-133
  • rbh
Cystine-binding periplasmic protein FliY {ECO:0000313|EMBL:EYR77409.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 261.0
  • Bit_score: 483
  • Evalue 2.40e-133
family 3 extracellular solute-binding protein; K02424 cystine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 257.0
  • Bit_score: 368
  • Evalue 1.90e-99

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGTTGAAGACCATTCTTTCCTACGCCGTGGCCGCAGGCCTTGCCTTTTCTGCGATTGCCCTGCCGATCTCCGCGAGTGCGGACGATCTCGACACCGTCAAGGCGGCGGGCGAATTCAAGTTCGCCAACAGCGGCGCCTATCCGCCCTTCAGCTTCGTCGACGACGGCAACCAGGTCGTGGGCTTCGATGTCGATATCGGCAACGAGATCGCCAGGCGTCTCGGCGTGAAGGGCGCGGGCGTCTCGACCGCCTGGGACGGCATCATCGCCGGCCTGCTGGCCGGCAAATACGATTCCATCATCGGAAGCATGACCATCACCCCGGAGCGTGAAAAGGCTGTCGATTTCGTCGGTCCCTACTACAAGTCCGGTCGTGGTATTTTCGTCACCCAGGGCTCTCCGATCAAGTCGATCGACGATCTCAAGGACAAGACCATCGGCGTGACGCTCGGCGAAACCCACGAGAAATGGGCGCGCGAACGCGGCGGCTGGGACATCCGCACCTACAAGGGCCTGCCGGAACTCTTCCTCGAACTGAAGGCCGGCCGCATCCAGGCGATGGTCGTCGACGCCGTTCCGGTGTCGATCGCTGTCAAGGAGACGGGCGAGAAGGTCGTCAAGCTCGACGTGCCGGAATTCGCCGGCAGCGAGGACAAGATCGGCATCGCCATCCGCAAGGGCAATCCGGAGTTGAAGGCCGCCATGCAGAAGGCGCTGGACGACATGATGGCCGACGGCACCTATGAGGCCATCGCCATGAAGTGGGTCGGTTCGGATATCCGCTGA
PROTEIN sequence
Length: 262
MLKTILSYAVAAGLAFSAIALPISASADDLDTVKAAGEFKFANSGAYPPFSFVDDGNQVVGFDVDIGNEIARRLGVKGAGVSTAWDGIIAGLLAGKYDSIIGSMTITPEREKAVDFVGPYYKSGRGIFVTQGSPIKSIDDLKDKTIGVTLGETHEKWARERGGWDIRTYKGLPELFLELKAGRIQAMVVDAVPVSIAVKETGEKVVKLDVPEFAGSEDKIGIAIRKGNPELKAAMQKALDDMMADGTYEAIAMKWVGSDIR*