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SCNpilot_expt_1000_bf_scaffold_1333_25

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 20814..21587

Top 3 Functional Annotations

Value Algorithm Source
FMN-dependent alpha-hydroxy acid dehydrogenase; K00104 glycolate oxidase [EC:1.1.3.15] similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 144.0
  • Bit_score: 167
  • Evalue 4.90e-39
2-hydroxy-acid oxidase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCQ6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 137.0
  • Bit_score: 189
  • Evalue 3.80e-45
2-hydroxy-acid oxidase {ECO:0000313|EMBL:AHB47805.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 137.0
  • Bit_score: 189
  • Evalue 5.30e-45

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGACGCAGGACAGGCCGGGCCTTCCCGTCGTCACCGTCGACGCGCCGGTCACGGGCTTGCGCAACAGCGAGCAGCGCGCCGGCTTCCGCCTGCCGGCGGCTGTGCGCGCCGTCAATCTCGACGGCATGGCAATGCTGGACATGGCCGGCGCGCCGGGACGCAGCCCGGTGTTTTCCGGCCTGCTCGATCATGCACCCGGATGGGGCGATATCGAATGGCTCAGGCGCGAAACGCCGCTGCCGATCCTGTTGAAAGGCATCCTCCACCCCGACGACGCCCGGCGTGCGCTCGCCTGCGGCATCGATGGCCTCGTCGTCTCCAATCACGGCGGGCGCACGCTCGACACGCTGCCAGCGACGCTCGACGCCCTGCCCGCCATCGCCACCGCCGTTCAGGGCCGGGTTCCGCNNNNNCGGCGGCATCCGGCGCGGAACGGATATCGTCAAGGCCCTGGCGCTGGGCGCGAGCGCCGTGCTGATTGGCCGCCCGCAACTGCACGCGCTCGCCATCGCCGGCGCAAGCGGCGTCGCCCATCTGCTGACCATCCTGCGCACGGAACTGGAAGTCGCGATGGTGCTGGCCGGCTGCTCAAGGCCCGATGCCATCGACAAGAATCTTGTCTGGCGGCCCTGATCGGCTTCATGGACGCGGCCGAACGCTTTCGACAGCAAGCCTATTGGCGGCTGCGGTTCTCTTTCATACGCATGGATACCGGCACCCGCGACCGCGACGATCCGTGCGGAATGCCGGAACATCGACCGGCGCCACGGTAA
PROTEIN sequence
Length: 258
MTQDRPGLPVVTVDAPVTGLRNSEQRAGFRLPAAVRAVNLDGMAMLDMAGAPGRSPVFSGLLDHAPGWGDIEWLRRETPLPILLKGILHPDDARRALACGIDGLVVSNHGGRTLDTLPATLDALPAIATAVQGRVPXXRRHPARNGYRQGPGAGRERRADWPPATARARHRRRKRRRPSADHPAHGTGSRDGAGRLLKARCHRQESCLAALIGFMDAAERFRQQAYWRLRFSFIRMDTGTRDRDDPCGMPEHRPAPR*