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SCNpilot_expt_1000_bf_scaffold_1143_15

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(13707..14141)

Top 3 Functional Annotations

Value Algorithm Source
Ribose transport system permease protein {ECO:0000313|EMBL:CDM59305.1}; EC=3.6.3.17 {ECO:0000313|EMBL:CDM59305.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 144.0
  • Bit_score: 270
  • Evalue 1.30e-69
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter n=1 Tax=Rhizobium sp. CF142 RepID=J1TBL9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 144.0
  • Bit_score: 270
  • Evalue 9.50e-70
sugar ABC transporter, permease; K10440 ribose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 144.0
  • Bit_score: 270
  • Evalue 3.90e-70

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Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
GTGACTGCCGTCGCCGCCTTCGTCCTCTACCGCACCCGTTACGGACGGCATGTGGTCGCGGTCGGGTCGAACAGCGATGTCGCCCGCTATTCCGGCATCGCCGTCAACCGCGTGCGCGCCATCGCCTTCGTCATCCAGGGCCTGTGCGTGGCGATTGCCGTGCTGCTCTACGTGCCGCGCCTCGGCTCGACCTCTGCAACGACCGGCATTCTCTGGGAATTGCAGGCGATCACTGCGGTCGTCGTCGGCGGCACGGCGCTGAAAGGCGGCGCGGGGCGCGTCTGGGGCACGATCTGCGGCGCCTTCATTCTCGAGCTCGTCGGCAACATCATGCTCTTGTCGAATTTCATCAGCGAATACCTGATCGGCGCGATCCAAGGCGCGATCATCATCATCGCCATGCTGGTGCAGCGCTCGCTGGTCCGTAAAGGCTAG
PROTEIN sequence
Length: 145
VTAVAAFVLYRTRYGRHVVAVGSNSDVARYSGIAVNRVRAIAFVIQGLCVAIAVLLYVPRLGSTSATTGILWELQAITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIGAIQGAIIIIAMLVQRSLVRKG*