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SCNpilot_expt_1000_bf_scaffold_2192_8

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 12079..12399

Top 3 Functional Annotations

Value Algorithm Source
Thioredoxin n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U3F6_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 106.0
  • Bit_score: 202
  • Evalue 1.80e-49
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 106.0
  • Bit_score: 202
  • Evalue 2.50e-49
trxA; thioredoxin; K03671 thioredoxin 1 similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 106.0
  • Bit_score: 200
  • Evalue 3.70e-49

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGGCTACCGTAAAAGTCGACAGCGCCAATTTCCAATCCGAAGTCCTCGATTCCGCCGAACCGGTTGTCGTGGATTTCTGGGCCGAATGGTGCGGCCCGTGCAAGATGATCGCCCCCAGCCTTGAGGAAATCTCGGCCGAGCTTGCCGGCAAGGTCAAGATCGCCAAGCTGAACATCGACGAGAACCCGGATCTGGCCGCCAAGTTCGGCGTGCGCTCGATCCCGACGCTCGCCATCTTCAAGGGCGGCGAAGTCGCCGACATCAAGGTTGGCGCCGCACCGAAGACCGCGCTGACGAGCTGGATTTCCGGCGCCGCCTGA
PROTEIN sequence
Length: 107
MATVKVDSANFQSEVLDSAEPVVVDFWAEWCGPCKMIAPSLEEISAELAGKVKIAKLNIDENPDLAAKFGVRSIPTLAIFKGGEVADIKVGAAPKTALTSWISGAA*