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SCNpilot_expt_1000_bf_scaffold_2192_12

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(15736..16956)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 406.0
  • Bit_score: 777
  • Evalue 1.20e-221
tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20] similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 406.0
  • Bit_score: 764
  • Evalue 1.40e-218
tryptophan synthase subunit beta n=1 Tax=Rhizobium giardinii RepID=UPI00036C29BB similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 406.0
  • Bit_score: 778
  • Evalue 3.00e-222
  • rbh

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
GTGAACGAGACGCCCAAACCCAATTCGTTTCGCGCCGGGCCGGATGAAGACGGCCGTTTCGGCATTTTCGGCGGCCGCTTCGTCGCCGAAACCCTGATGCCGCTGATTCTCGACCTGCAGGACGAGTGGAACAAGGCCAAGACCGATCCCGAATTCCAGGCGGAACTGAAGCAGCTCGGCGCCCATTACATCGGCCGCCCCAGCCCGCTCTATTTCGCCGAGCGCCTGACGGAGCATCTCGGCGGCGCAAAAATCTACTTCAAGCGCGAGGAGCTGAACCACACCGGCTCCCACAAGATCAACAATTGCATCGGCCAGATCCTGCTGGCCAAGCGCATGGGCAAGACGCGCATCATCGCCGAGACGGGTGCAGGGCAGCATGGCGTCGCCTCCGCGACCGTCGCGGCGCGCTTCGGTTTCCCTTGCGTCGTCTACATGGGCGCGACTGACGTGCAGCGCCAGGCGCCGAACGTTTTCCGCATGAAGTTGCTTGGCGCCGAAGTGCGCCCGGTCACCTCCGGCAGCGGCACGCTGAAGGACGCGATGAACGAGGCGCTGCGCGACTGGGTCACGAATGTCGACGACACCTATTATCTGATCGGTACCGCCGCCGGCCCGCATCCCTATCCGGAACTGGTACGCGATTTCCAGGCTGTCATCGGCCAGGAAGCCCGCGAACAGATTCTCGAAGCCGAGGGACGTTTGCCGGATCTGGTGGTTGCGGCTGTCGGTGGCGGTTCGAACGCCATCGGCATCTTCCATCCCTTCCTCGATGACGAGGGCGTGCAGATCGTCGGCGTCGAAGCCGGTGGCAAGGGCCTGCAGGGCGAGGAGCATTGCGCCTCGATCACCGCCGGTTCGCCCGGCGTGCTGCATGGCAACCGCACCTATCTGCTGCAGGACGGTGACGGCCAGATCAAGGAAGGACATTCGATTTCCGCCGGTCTCGATTATCCCGGCATCGGCCCGGAGCATTCCTGGCTGCACGATATCGGCCGCGTCGAATACGTGCCGATCATGGACGAGGAAGCGCTGGAAGCTTTCCAGCTGCTGACGAAGCTCGAAGGCATCATCCCGGCGCTGGAGCCCTCCCACGCGATTGCCGAAGTGATCAAGCGTGCGCCGAAAATGCGCAAGGACCAGATCATCGTGATGAACCTCTCCGGCCGCGGCGACAAGGATATTTTTACCGTCGGCAAGATCCTCGGTATGGAGCTTTAA
PROTEIN sequence
Length: 407
VNETPKPNSFRAGPDEDGRFGIFGGRFVAETLMPLILDLQDEWNKAKTDPEFQAELKQLGAHYIGRPSPLYFAERLTEHLGGAKIYFKREELNHTGSHKINNCIGQILLAKRMGKTRIIAETGAGQHGVASATVAARFGFPCVVYMGATDVQRQAPNVFRMKLLGAEVRPVTSGSGTLKDAMNEALRDWVTNVDDTYYLIGTAAGPHPYPELVRDFQAVIGQEAREQILEAEGRLPDLVVAAVGGGSNAIGIFHPFLDDEGVQIVGVEAGGKGLQGEEHCASITAGSPGVLHGNRTYLLQDGDGQIKEGHSISAGLDYPGIGPEHSWLHDIGRVEYVPIMDEEALEAFQLLTKLEGIIPALEPSHAIAEVIKRAPKMRKDQIIVMNLSGRGDKDIFTVGKILGMEL*