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SCNpilot_expt_1000_bf_scaffold_3195_21

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(18554..20095)

Top 3 Functional Annotations

Value Algorithm Source
Transposase family protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QR83_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 508.0
  • Bit_score: 624
  • Evalue 1.20e-175
Transposase {ECO:0000313|EMBL:KAJ34157.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 373.0
  • Bit_score: 690
  • Evalue 2.50e-195
tnpA; ISL3 family transposase TnpA similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 475.0
  • Bit_score: 620
  • Evalue 4.20e-175

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1542
ATGCGGACCCGATTTCGACCTTCCGATCTGACCCCCGCCGAATTCAACGTTGAAGCAGTGTACGATGCGGCTGGCGCGATCGTTGTCGTCGCGTCTGGCCGGTCACAAGAATGTAGGTGCCCCCACTGTGGAACCGTCTCCCGGCGCGTTCATAGTCGCTATCCTCGGATGCTTGTCGATCTGCCGTGTGCGGGTCGGCGGCTCGAACTTCATCTGACCGTCAGACGCTTCGTCTGTAGTGCCGGCAACTGCCGCCGAAAAATTTTCGCCGAGCGCTTCGGCGACGATGTAATTCGCCCCATGGCTCGCCGGACAGCACGCCTGGACTGTCTGGTTCGCCATCTCGCTCTCGCATTGGGTGGTCGTCCGGCGGCCCGATTTGCAGATCGTCTCGGATTCCCGGTGAGCAATGATACGCTGCTGCGAACCGTTCGCCGATACGACCGCCCTGCGCCGATACCACCGAACGTCATCGGCATTGATGACTGGGCCTGGCGACGCAATCATCGATACGGCACCATCATTTGCGATCTTGAACGCCGAAGAACAATCGCATTGTTATCCGACAGGGAACAGGCGACCGCCGAGGCCTGGCTGATCCAGCAACCGCAGATCGAGATCGTCGCAAGAGACCGTGGCGGTGGATATGCGCAGGCCGTCGCACGAGCTCTCCCACACGCTGATCAGGTTGCCGACCGTTGGCATCTGATGGAAAACGCCAGCCACGCCTTTCTCGACACTGTTCGCAAATCGATGCGGCAGGTCCGGATGGCGATCGGCACTGCAACCGTAAATCCGAAACTTCTGACTGCCGCTGAGCGGCTGCAATACGAGGGATATCTGCGGCGCGAAGAGGCAAATGCCGTTATCCGCGGGTTCGTCGCCGATGGTGCCTCCATCAAGGAAATTGTGCGCCGAACTGGGCATAGCCGAAAGCTGGTCCGCAGTGTCGTTCGTGGTCAGCGGACAGACATCTTCCGGGTCCGGCAAACCTCTCTCGAACCGCACCTGCCTTGGCTTGAAGCTCAATGGGATGTTGGATTGCGTAATGGTGCCGAACTGTGGCGGAGGCTTCGGCTGACTGGTTTTGGCGGAGGCCTGCGTGTTGTCACCGAATGGGCAACGAGACGAAGACGGGCAGAAAAGGCTGAAAGCGGACTCGGCTATGCTCCCGCCGCGCGTACCGTCGTTCGCCTGATGACCCTCGAGCGCAACAACCTGACCAAGGCTCAAACGATGACGGTTGCCGCCATCGAAGAGAGGCTGCCGGACCTTGTAGAGGCCAGGGACGTCGTCGAGAGCTTCCATGACATGTTGCGCCGCAAGTCCTCCGGTGATCTGGAGGCCTGGATCGAACGCGCGGCGAAAAGTCTGGTCGCATCATTCGCGACTGGCGTCATCCGAGACCGAGCCGCAATCCAGAATGAGATAATCTCCCAGTGGTCGAACGGCCAGACGGAAGGCCAGATCACAAAGCTCCAGCTCATCAAACGGCATGTGTGGACGGCCTCTGCGTTGCAAGCGGAATCTTTCGTGGCATAG
PROTEIN sequence
Length: 514
MRTRFRPSDLTPAEFNVEAVYDAAGAIVVVASGRSQECRCPHCGTVSRRVHSRYPRMLVDLPCAGRRLELHLTVRRFVCSAGNCRRKIFAERFGDDVIRPMARRTARLDCLVRHLALALGGRPAARFADRLGFPVSNDTLLRTVRRYDRPAPIPPNVIGIDDWAWRRNHRYGTIICDLERRRTIALLSDREQATAEAWLIQQPQIEIVARDRGGGYAQAVARALPHADQVADRWHLMENASHAFLDTVRKSMRQVRMAIGTATVNPKLLTAAERLQYEGYLRREEANAVIRGFVADGASIKEIVRRTGHSRKLVRSVVRGQRTDIFRVRQTSLEPHLPWLEAQWDVGLRNGAELWRRLRLTGFGGGLRVVTEWATRRRRAEKAESGLGYAPAARTVVRLMTLERNNLTKAQTMTVAAIEERLPDLVEARDVVESFHDMLRRKSSGDLEAWIERAAKSLVASFATGVIRDRAAIQNEIISQWSNGQTEGQITKLQLIKRHVWTASALQAESFVA*