ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3195_29

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(28291..28983)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003778E05 similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 209.0
  • Bit_score: 269
  • Evalue 3.40e-69
Uncharacterized protein {ECO:0000313|EMBL:KGF68027.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 202.0
  • Bit_score: 176
  • Evalue 5.50e-41
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 200.0
  • Bit_score: 145
  • Evalue 2.30e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hoeflea sp. BAL378 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGCCGAGCAATCAAGGTGCCAAGCGCCTACCCGAAACATCACCCGACATGGGCAAGGTCCGCGCTGCGGATGCGATCTATCAGGTGCTGCGTCATGACATCGCCTTCGGAAGGCTGATGCCGCGCCAGCGTCTGGTGGAGAGTGATCTCTGCGAGCGTTTCGGCACATCGAACCACAATATCCGGCAGGCTTTCGAGCTTCTCGACCGCGTTGGGCTGATCGAACGCAAGGCCAATCGCGGCGTCGAGGTGAAGGCGCTTTCCACCGAAGAACTCAAGGATCTCTACGACATGCGCGTGATCCTTCAGACCGAGGGCGCCAAGCGCCTGGATCTGTCGCGTTCGACCGAGATCGTGGCAAAGCTGACCGAGATCAACGATGCCTATGAGAAGGCGCTGGACGAGGGCCGGTTCGAAGCTGCGGCGGAGGCCAACGACGCCTTTCACATGACGACATTCGACTACTGTCTGAACGCGGAGCTCGCGAAGCTCCAACGCAGCTACTGGCTCCGCGCTTCGGCAATCATTTCGCGCGCGCTCAGTGACAGCAGTCTGTCGCATGGGTCGCGGCGCGATCATCGGGAGATCATTGCGGCGATAAGAGACGGAAACGTCGAGAGACTGGTTGAGGTGGCGGTGTCCCACATCCGCCCCGCCGTGGACGTTTACAAACGGCTCTACGGGCTGTTCTAG
PROTEIN sequence
Length: 231
MPSNQGAKRLPETSPDMGKVRAADAIYQVLRHDIAFGRLMPRQRLVESDLCERFGTSNHNIRQAFELLDRVGLIERKANRGVEVKALSTEELKDLYDMRVILQTEGAKRLDLSRSTEIVAKLTEINDAYEKALDEGRFEAAAEANDAFHMTTFDYCLNAELAKLQRSYWLRASAIISRALSDSSLSHGSRRDHREIIAAIRDGNVERLVEVAVSHIRPAVDVYKRLYGLF*