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SCNpilot_expt_1000_bf_scaffold_3583_6

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 4256..5293

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00037D13BB similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 351.0
  • Bit_score: 386
  • Evalue 2.80e-104
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 356.0
  • Bit_score: 385
  • Evalue 2.00e-104
LacI family transcriptional regulator {ECO:0000313|EMBL:ESY62192.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 359.0
  • Bit_score: 385
  • Evalue 6.80e-104

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Taxonomy

Mesorhizobium sp. LNHC232B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGGCACGGCGCGCTGCGCAAACCCCCACGGCCCGCAAGGCGACGATGACCGATGTCGCGCGCCTTGCCGGCTGCTCGCAGGCAACGGTGTCCTTCGTTCTCAACAATGCCGTCGGCGTGAAGATTTCCGAGGAAACCCGGCAGAAGGTGATTCAGGCCGCCCGCTCGCTCAAATATGGAGAGGCGTCGCCGATCGCGCGGGCGGCGATGGATGGGCCGGAGAGTTTCGGCTTCGTCGTCGACCAGATGGCGACGAGCCCGGAAACCGTCAACGCGCTGGAGGGCGCGCGCCAGGCTTCCTGGGAGGAAGGGACGGTCATCCTCGCGGCCCAGACCATGGGCATCCGTTCCATGGAGGACTCCGTCGTGCGCAGCTTGAGCCGCGGCGGCGTCTCCGGTCTCGTCTATATGTCGATCTTCACCCGGCGCGTCACGCTGCCCGCCATCCTTTATGACTTGGACATTCCCGTCGTCCTGCTGAATTGCTATAGCGACGACAATCAATTTCCCTCGGTCGTGCCGGACGATTTCGAGGGCGGGCGCCGGGCGGCGCAGGCGTTGATCGCCAGGGGCCGGCGCCGTATCGCCACCATCACCGGCGAACCCTTCATGGAGGCGAGCCTCGACCGTCTCAAGGGTTATCGCCGGGCGCTGGACGAGGCTGGCCTGCCGCATGACCCGGAACTGACCCTGGAAGGCAACTGGTCGCCGACCTCGGGCTACGAGGCGACGCGGCGGCTTCTGGCGCATAGGGATCGGCCGGATGCGATCTTCTGCCAGAACGACAAGATGGCGTCGGGTTGCTACGAGGCGGTTCGCGAGGCCGGCCTCGCCATCGGCAGCGACATCTCCATTATCGGGTATGACGACGATGAAATCTGCCGCCACCTGCGCCCGCTGCTGAGCACGATCATCTTGCCGCATCGGGAGATGGGCGCCTGGGCGGTGAACGCCCTGCGCCGGGCCAGGCCGGGGAAGGCGGGCGCCTACCGCCCGCACCGGGCTTCGGTGGTCTATGTCGAGCGTAACTCGATTTGA
PROTEIN sequence
Length: 346
MARRAAQTPTARKATMTDVARLAGCSQATVSFVLNNAVGVKISEETRQKVIQAARSLKYGEASPIARAAMDGPESFGFVVDQMATSPETVNALEGARQASWEEGTVILAAQTMGIRSMEDSVVRSLSRGGVSGLVYMSIFTRRVTLPAILYDLDIPVVLLNCYSDDNQFPSVVPDDFEGGRRAAQALIARGRRRIATITGEPFMEASLDRLKGYRRALDEAGLPHDPELTLEGNWSPTSGYEATRRLLAHRDRPDAIFCQNDKMASGCYEAVREAGLAIGSDISIIGYDDDEICRHLRPLLSTIILPHREMGAWAVNALRRARPGKAGAYRPHRASVVYVERNSI*