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SCNpilot_expt_1000_bf_scaffold_3956_13

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 7289..7600

Top 3 Functional Annotations

Value Algorithm Source
Response regulator of the LytR/AlgR family n=1 Tax=Methylomicrobium album BG8 RepID=H8GNE2_METAL similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 103.0
  • Bit_score: 161
  • Evalue 4.50e-37
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:EIC28371.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 103.0
  • Bit_score: 161
  • Evalue 6.30e-37
LytTR family two component transcriptional regulator; K08083 two-component system, LytT family, response regulator AlgR similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 100.0
  • Bit_score: 95
  • Evalue 1.20e-17

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Taxonomy

Methylomicrobium album → Methylomicrobium → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
GTGAAATCGCAGGGCGAGTATCTACGAATCGCTCCCGAAACAATCATCCGCTTCCAGGCTGACCGTGACTATGTGCGGGTTCATATCGCGGGTGCGGACTACCTCTATCAGGAAAATCTCGCCTCGCTCGAACGCCGCCTCGATCCGGCCGACTTCACGCGTATCCACCGCAGCACGATCGTTCGCCGGAGCGCGATCGCTCGAATTAAGACGGCTCCCTTCGCTGCCCTGATAGCCGTCCTGTCCGACGGGTCGGAAGTGCGCGTAGGAAGAACCTACGCGACCGGCATACGGGCGGCTTTGGCCCGCTGA
PROTEIN sequence
Length: 104
VKSQGEYLRIAPETIIRFQADRDYVRVHIAGADYLYQENLASLERRLDPADFTRIHRSTIVRRSAIARIKTAPFAALIAVLSDGSEVRVGRTYATGIRAALAR*