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SCNpilot_expt_1000_bf_scaffold_3523_1

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 2..871

Top 3 Functional Annotations

Value Algorithm Source
Aminotransferase class-III n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ENV2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 289.0
  • Bit_score: 548
  • Evalue 3.60e-153
Aminotransferase class-III {ECO:0000313|EMBL:EYR77405.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 289.0
  • Bit_score: 548
  • Evalue 5.10e-153
class III aminotransferase similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 288.0
  • Bit_score: 478
  • Evalue 1.10e-132

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
CGCGACATGCCGCACATCAAGGCCCCGACCGCCTATCTCGACCGCGACAATTTTTCGATGGAGGAGCGCGGGCTTCGCTATGCCGACATGCTGGAGGAAAAAATCCTGGCCGAGGGGCCGGAAAGCGTGCTCGCCTTCATCATGGAGCCGATCGGCGGCGCGTCCACCGGTGCGCTCGTCGCGCCTGACAGCTATTATCCGCGCATCCGCGAGATCTGCGACAGATACGGCATCCTGCTGATCCATGACGAGGTGATGAGCGGGGCGGGCCGCACCGGGCGCTATCTCGGCGGCGACCACTGGAATTGCCGGCCGGATATTATTGCGCTCTCCAAGGGGCTGGGCGCCGGCTATTGCCCGCTCGGCGCGATGATCGCCCATTCGAAGCTGGTGAAACCCGTGCTCGATCGCGGCGGCTTCGCCCATGGCTATACCTATGCCGGCAATCCGCTCGCCTGCGCCGCCGGCCTTGCCGTGCTCGACGAGATCGAGCGGCAGGATCTGCTCGGCAACGCCACCCGCATCGGCGCTCTCATGAAGGCGGAACTGGAGGGACTTGCCGAACGCTACCCCTTCATCGGCGACGTGCGCGGCAAGGGCCTGCTGCTCGCCGCCGAATTCGTCGCCGACCGCGAAACCATGGCGCCGTTGCCGAAGGCGCTCGAGGCGCACCAGCGCGTCGTCGACATCGCCTATGAGCGCGGCTTGATCATCTATTCGCGGCGCACGCGCGGCGGCGTCGAGGGCGATCATTTCCTCGTCTGCCCGCCGATGATCACCACGCAAGAACAGGTCGGTGAGATCGTGGCGATCCTCGACGCGACGCTCGACCAGCTTGCCGGCGAGCTTTCGCTGCCGGTGCGCAAATAG
PROTEIN sequence
Length: 290
RDMPHIKAPTAYLDRDNFSMEERGLRYADMLEEKILAEGPESVLAFIMEPIGGASTGALVAPDSYYPRIREICDRYGILLIHDEVMSGAGRTGRYLGGDHWNCRPDIIALSKGLGAGYCPLGAMIAHSKLVKPVLDRGGFAHGYTYAGNPLACAAGLAVLDEIERQDLLGNATRIGALMKAELEGLAERYPFIGDVRGKGLLLAAEFVADRETMAPLPKALEAHQRVVDIAYERGLIIYSRRTRGGVEGDHFLVCPPMITTQEQVGEIVAILDATLDQLAGELSLPVRK*