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SCNpilot_expt_1000_bf_scaffold_3523_9

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(8258..10408)

Top 3 Functional Annotations

Value Algorithm Source
diguanylate cyclase n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI00036C6F38 similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 713.0
  • Bit_score: 702
  • Evalue 3.70e-199
  • rbh
sensory box/GGDEF family protein similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 721.0
  • Bit_score: 701
  • Evalue 2.60e-199
  • rbh
Sensory box/GGDEF family protein {ECO:0000313|EMBL:ADY65888.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 721.0
  • Bit_score: 701
  • Evalue 1.20e-198

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Taxonomy

Agrobacterium sp. H13-3 → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2151
ATGATGCTCGAAAGGCAGGCCGAATGCGGCGATGCGAGGGACGGCACGGCCGCGCCGCGTGCCGCCTTGCCGGAGGCGTCCATGCAGCCCGATCCGCCGGCCTTGCGCCTTGCCGGCCGGTTCGACTGGCTGGAGGCGATGATCAATCACGTTCCCGATTTCATCTATGCCAAGGACCGCTCGGGACGTTTCCTCTTCGCCAACCAGGCGATCGTCAATGCCAACGGCCTGTCTTGCGTCGAGGATCTGATCGGCCTCACCGATACCGACCTGCACGGCAAGGCTGCCGCCGACGCCAAGATCGCCGAAATCGAGCAGCGGGTGATGGAGACCGGCGAGCCCGACCTCGGCTATGAGGAGCGGGCGTTGCGCGGCGGCCCGGATCGCTGGATGATGATGTCGCGCGTGCCGCTGCGCGACAAGGACGGCAACGTCATCGGCGTCGTCGGCGCCTCCCGCGACATCACCGCGCGAAAGGGCTCCGAGCGGTTGATGCGCGCCCAGGCCCGCATTCTCGAAATGATCGTCGGCAGCGTGCCGCTTCCCGCTTTTTTCGATGAATTCGCCGGCCTGCTCGAAGGGCTCGCGACCGGCGCCCGCGCCTGCATCCGCATCGAGGCCTGCGAGCGCGGGCAGCCGTTCCAGTCCGGCTCCCTGGCGCTGTCCGAGCCGGAAAGCGACGGCTGTCTCCAGCTTCCCATTCCCGCCGCCGATGGCGGCACGCATGGCGCCATCGGCTTTTCGATGCCGGAGGAGCGGCTGGATCGCAACCTCGGCGAATTCATCGCCGTCGCCACGCGCATGGCCGGCATCGCCATCGATCGCTGGCGGGCGGAGGAGCGCATCCGTTTCCTCGCCGAACACGACGCCCTGACCAGCCTGCCCAATCGCGGTTTCCTCGAGAGACGGCTGGCGTCCCTCCTGCGGGAGGCGGAGGCTGCCGGCCGCCACATCGCCATCGGGTTCCTCGATCTCGACAATTTCAAGCTGATCAACGATACGCAGGGCCACGGCACCGGTGACGCCCTGCTGAAGACGGTCGCCGCCCGGCTTTCCGCCGCCATCGGCCCGGATGGGCTGGTGGCGCGCATCGGCGGCGACGAGTTCATCCTCGTGTTGCAGGGCGACAGTGACGGTTTCGAGCCGCGCCTGCAAGATATCCGCCGGCTGATCGGCCAGCCAGTGACGCTCGACACCATCGACCTGCATGTGACCTGCAGCATCGGCATGGCCTATTTCCCGACCCATGGCGCCACGGCCTGCGAGTTGCTGGCGGCGGCGGACATGGCGATGTACCGGGTAAAGGACAGCGGCCGCAACGACCTGCAGATCTTCTCGCCCCGGCTTGCCGCCGAGGCCCGCCGCCGCCTCGCCCGCGCCGAGGAATTGCGCCGGGCGCTGAAGCGCGACGAATTCATCCTGCATTATCAGCCGCAATACAATCTGGCGACCGGCGCGATGACCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCGTCCAGCCGAATGATTTCATTCCGCTGGCCGAGGAAATCGGCATCATCGTCGAACTTGGGGCCGCCGTCCTGAAAATGGCCTGCCGCGACGGCAGGCGCTGGCAGGACAAGGGCCTGCCTCCCATCCGCATCGGCGTCAACATGTCGGCCCGGCAGTTCCGCGATCAGTCGATGACGGCCCAGGTCGCGTCCACCCTTGCCGAAACCGGGCTGGAACCGCGCCGCCTCGAAATCGAGCTGACGGAAAGCCTGATCATGACCGATATCGCCGCCTCGGTGAAGGCGATGCGGGCCCTGACCGGCATGGGCATCCAGCTTGCGCTCGACGATTTCGGCACGGGCTATTCCAGCCTCGCGACGCTGAAATCCTTCCCGCTGACCCGGCTGAAGATCGACAAGTCCTTCATCGAGCATGTGCCGGAGGATGGCCAGGACGCGGCGATCCTGTCGGCGATCGTCAATCTCAGCCGCAGCCTCGATCTCGACGTGGTCGCCGAGGGCGTGGAATCGCGCCGGCAGCTCGATTTCCTGCGCCAGGCCGGCTGCCACCACGCCCAGGGCCATTTCTTCTCGACCGCCGTGTCCGCCGGCATCATCGAGCGCATGGTTGGCGGCGAGGACGAGCAACCGACGGCGCTTGCCGTCAACGCCTGA
PROTEIN sequence
Length: 717
MMLERQAECGDARDGTAAPRAALPEASMQPDPPALRLAGRFDWLEAMINHVPDFIYAKDRSGRFLFANQAIVNANGLSCVEDLIGLTDTDLHGKAAADAKIAEIEQRVMETGEPDLGYEERALRGGPDRWMMMSRVPLRDKDGNVIGVVGASRDITARKGSERLMRAQARILEMIVGSVPLPAFFDEFAGLLEGLATGARACIRIEACERGQPFQSGSLALSEPESDGCLQLPIPAADGGTHGAIGFSMPEERLDRNLGEFIAVATRMAGIAIDRWRAEERIRFLAEHDALTSLPNRGFLERRLASLLREAEAAGRHIAIGFLDLDNFKLINDTQGHGTGDALLKTVAARLSAAIGPDGLVARIGGDEFILVLQGDSDGFEPRLQDIRRLIGQPVTLDTIDLHVTCSIGMAYFPTHGATACELLAAADMAMYRVKDSGRNDLQIFSPRLAAEARRRLARAEELRRALKRDEFILHYQPQYNLATGAMTGXXXXXXXXXLVQPNDFIPLAEEIGIIVELGAAVLKMACRDGRRWQDKGLPPIRIGVNMSARQFRDQSMTAQVASTLAETGLEPRRLEIELTESLIMTDIAASVKAMRALTGMGIQLALDDFGTGYSSLATLKSFPLTRLKIDKSFIEHVPEDGQDAAILSAIVNLSRSLDLDVVAEGVESRRQLDFLRQAGCHHAQGHFFSTAVSAGIIERMVGGEDEQPTALAVNA*