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SCNpilot_expt_1000_bf_scaffold_3523_10

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(10709..12223)

Top 3 Functional Annotations

Value Algorithm Source
Long-chain-fatty-acid--CoA ligase LcfB {ECO:0000313|EMBL:EYR83959.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EYR83959.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 504.0
  • Bit_score: 889
  • Evalue 2.80e-255
Long-chain-fatty-acid--CoA ligase LcfB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYK1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 504.0
  • Bit_score: 889
  • Evalue 2.00e-255
  • rbh
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 503.0
  • Bit_score: 830
  • Evalue 3.40e-238
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1515
ATGAGCAACCATCTTTTCGACGCGATCCGCGCCGCCGCCGACCCTGAGGCACCGTTCATCGAGACGGCCGACGGCCGGCGATGGACCTATGGCGACATGCTCGGCCTCTCCGGCCAGTTGGCCGGCGCGCTCGCAGCCCTTGGCGTCACCCCCGGCGATCGCGTCGCCGTGCAGGTCGAAAAGAGCCCGGAAGCCCTGATGCTCTATCTCGCCTGCGTGCGTGCAGGGGCCGTCTATCTGCCGCTCAACACCGCCTATACACTGGCCGAACTGGATTATTTCATCGGCGACGCCGAGCCGCGCCTGGTGGTCGTCGCGCCGAAATCGCGCGACGGGGTGTCCGCCATCGCCGAAAAATACAGCGCCCGCGTCGAGACGCTGGACGACGCCGGCGGCGGCTCTCTGCTCGATCTCGCCCGCACGCAAAATGCCGAATTCGTCGATGTCGAGCGCGGCCCGGACGATCTCGCCGCCATCCTCTACACATCGGGCACCACCGGCCGCTCCAAGGGCGCGATGCTGAGCCATGACAACCTGCTCTCCAACGCCGCGACGCTGCGCGACCATTGGCGCTTCACCAGCGCCGACAAGCTGATCCACGCCCTGCCGATCTTCCACACCCACGGCCTGTTCGTTGCCTCCAACGTGACGCTGCTCTCCGGCGCCTCGATGTTTTTCCTGTCGAAATTCGACGCCGACGAGGCATTGCGGCTGATGCAGACCGCCACGGCGCTGATGGGCGTGCCGACCTTCTATGTCCGCCTCGTCCAGCATCCCGGCCTGACGCGTGAGGCGACGGCGAAGATGCGCCTGTTCGTCTCCGGCTCTGCGCCGCTGCTCTCCGAAACCCATCGCAGCTTCTCGGAAAAAACCGGCCATGCCATCCTCGAACGCTACGGCATGACCGAAACCAACATGAACACCTCCAACCCCTATGACGGCGACCGCATCGCCGGCACCGTCGGCTTTCCGCTGCCGGGCGTCTCGGTGCGCGTCACCGATCCCGACAGCGGCACCCCGGTCGCCGATGGCGTGACCGGCATGATCGAGGTCAAGGGCCCGAATGTCTTCAAGGGTTACTGGCGCATGCCGGAAAAGACGGCGGCCGAATTCCGCGCCGATGGCTTCTTCATCACCGGCGACCTCGGCAAGATCGACGAGCGCGGCTATGTCCATATCGTCGGACGCGGCAAGGATCTGGTGATTTCCGGCGGCTACAACATCTATCCCAAGGAAGTGGAGACCGAGATCGACGCCATGCCCGGCGTCGTCGAAAGCGCTGTCATCGGCGTGCCGCATCCCGATTTCGGCGAGGGCGTCACCGCCGTCGTCGTGCGCGAAAAGGGTGCGACCCTGGATGAAAAGGCCGTGCTCGATGGCCTGAAGGACCGGCTCGCCCGCTACAAGCAGCCCAAGCGCGTCCTCTTCGTCGACGACCTGCCGCGCAACACCATGGGCAAGGTGCAGAAGAACATCCTGCGCCAGACCTATGGCGATCTCTACGCCGGAAAATAA
PROTEIN sequence
Length: 505
MSNHLFDAIRAAADPEAPFIETADGRRWTYGDMLGLSGQLAGALAALGVTPGDRVAVQVEKSPEALMLYLACVRAGAVYLPLNTAYTLAELDYFIGDAEPRLVVVAPKSRDGVSAIAEKYSARVETLDDAGGGSLLDLARTQNAEFVDVERGPDDLAAILYTSGTTGRSKGAMLSHDNLLSNAATLRDHWRFTSADKLIHALPIFHTHGLFVASNVTLLSGASMFFLSKFDADEALRLMQTATALMGVPTFYVRLVQHPGLTREATAKMRLFVSGSAPLLSETHRSFSEKTGHAILERYGMTETNMNTSNPYDGDRIAGTVGFPLPGVSVRVTDPDSGTPVADGVTGMIEVKGPNVFKGYWRMPEKTAAEFRADGFFITGDLGKIDERGYVHIVGRGKDLVISGGYNIYPKEVETEIDAMPGVVESAVIGVPHPDFGEGVTAVVVREKGATLDEKAVLDGLKDRLARYKQPKRVLFVDDLPRNTMGKVQKNILRQTYGDLYAGK*