ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4425_16

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 19873..20826

Top 3 Functional Annotations

Value Algorithm Source
Transport system permease protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETN6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 321.0
  • Bit_score: 497
  • Evalue 1.10e-137
Transport system permease protein {ECO:0000313|EMBL:EYR78134.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 321.0
  • Bit_score: 497
  • Evalue 1.50e-137
transporter permease; K02015 iron complex transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 321.0
  • Bit_score: 439
  • Evalue 1.10e-120
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGACATCGGCATTTTCCATTTTTCCGTCGCGCCGTGGGGTGGTGGCGACGCTCGGGCTTGCCGCCTTGGGTGTGCTCAGCCTGTTCGTCGGCGTCAGCCCGCTGCCGCCGGGACGGCTGCTGCGCGATCCGCAGGCGCTGCAGCTTCTCGTCGTCAGCCGTCTGCCGCGCACGCTGGCGGCGCTGCTGGCCGGCGCTGGCCTCGCGATTGCCGGACTGATCATGCAGACGCTGGCGCGCAACCGTTTCGTCGAGCCGGCGACAGCAGGGACGGCGCAGAGCGCCGAACTCGGCATTCTCCTGGTGACGCTGCTCTGGCCGGCAGCAGCGCTGCCCTTGAAGACGTTGATCGCCGCCGGCACGGCTCTGTTCCTGGCGACGGCGCATCGTCTGCCGCCGACCCAGCCCTTTCTCGTGCCGCTGTTCGGCATCGTCTATGGCGGCGTCATCGGCGCGGCCGCCACCTTCGCCGCCTGGCAGGCGGGGCTGCTGCAATTCCTGTCGATCTGGACCAGCGGCGATTTTTCCGGCGTGCTGCGCGGCCGCTATGAATTGCTTTGGCTTGCGGCGGCGATGGTCGCGGTCGCCTGGGTTGCCGCCGACCGGCTGACGATCATGGCGCTGGGACGCGATGCCGCCATCGGGCTCGGCATCGATCCCGCGCGAATGATGCAGCTCGGCCTTGTCATCGTCTCGGTCGTCTCGGCGCTTACCGTCGTCGTGGTCGGCATGATTCCCTTTGTCGGGCTGGTGGTGCCGAATCTGGCGGCGCGGCTGATCGGCGACAACATGCGCGCCACGCTCGGCTGGGTGGCCTTCGGCGGCGCCACGCTGGTGCTCGGCTGCGATATCGCCGGCCGCCTGATCCGCTTCCCTTACGAAATCCCGGTGGGAACGGTGATGGGCGTGGTCGGCGGCATCCTCTTCCTCTGGCTGCTTCTGCGGCGATCCTAG
PROTEIN sequence
Length: 318
MTSAFSIFPSRRGVVATLGLAALGVLSLFVGVSPLPPGRLLRDPQALQLLVVSRLPRTLAALLAGAGLAIAGLIMQTLARNRFVEPATAGTAQSAELGILLVTLLWPAAALPLKTLIAAGTALFLATAHRLPPTQPFLVPLFGIVYGGVIGAAATFAAWQAGLLQFLSIWTSGDFSGVLRGRYELLWLAAAMVAVAWVAADRLTIMALGRDAAIGLGIDPARMMQLGLVIVSVVSALTVVVVGMIPFVGLVVPNLAARLIGDNMRATLGWVAFGGATLVLGCDIAGRLIRFPYEIPVGTVMGVVGGILFLWLLLRRS*