ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4445_7

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(6648..8786)

Top 3 Functional Annotations

Value Algorithm Source
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Rhizobium sp. CF080 RepID=J3BQK5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 705.0
  • Bit_score: 1104
  • Evalue 0.0
Multidrug efflux system protein AcrB {ECO:0000313|EMBL:CDN50076.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 705.0
  • Bit_score: 1108
  • Evalue 0.0
acrB; acriflavin resistance protein B; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 707.0
  • Bit_score: 1096
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Neorhizobium galegae → Neorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2139
ATGGCTCATTTCTTCATCCAACGTCCGATCTTCGCCTGGGTCATCGCGATCGTCATCATGCTTGGGGGCGCCCTGGCGATCTTCACGCTGTCGACCACGGTGCGCATCACGGCCGCCTATAACGGCGCCAGCGCCGAAACCGTCGAGAAATCGGTGACGACCCTGATCGAGGACGGCATGACGGGCCTCGACGACCTGACCTACATGACCTCGTCCTCGACCACCGGCAGCGCCGAAGTGTCGCTGACCTTCGGCAACTCGGTCAATCCCGACATCGCCCAGGTCCAGGTCCAGAACAAGCTGCAGCTCGTGCAATCGCAGCTTCCCGACGTCGTCCAGCAGGCCGGCATCACCGTGTCGCGCTCGACGTCGAGCATCCTCATGGTCGGCGCGCTGGTCTCGGTCGACGGCAAGCGCAGCTCGGTCGATCTCGGCGACCTCGTCTCCAGCCAGATCGAGGACCAGATCAAGCGCCTGGAAGGCGTCGGCAGCATCAATATCTTCGGCTCGGGCTATGCCATGCGCATCTGGCTCGATCCGTTCAAGCTGCAGAAATACCAGTTGACCCCCGCCGACGTGACTTCGGCGATCCAGGCGCAGAACACCCAGGTTTCCGTCGGGTCGCTCGGCGCCCAGCCGCTCGCGCGCGGCCAGCAGATCAACATCACCATCACCGCGCAGAGCCAGCTCAACACCGTTTCCGAATTCGAATCGATCATCCTCAAGGTCGAGAAGGACGGCGCCACCGTTCGCCTGAGCGACGTCGCCCGCATCGAGATCGGCGAGGAGAGCTATGGCGGCGCCACACGCGCCAACCGCATGCCCGCCAGCGGCTTCGCCGTCAACCTGGCGACCGGCGCCAACGCGCTCGATACCGCCGCCCGCGTCAAGGATGCGCTGAGCGCCATCGCGCCCACCCTGCCGCATGGTGTCGAGATCCAATATCCTTACGACACCACGCCCTTCGTCAAGCTGTCGATCGAGAAGGTCGTCGAAACGCTCGTCGAAGCCATCGTGCTCGTCTTCGTGGTGCTGCTGATCTTCCTGCAGAACCTGCGCGCCACACTGATTCCGATGATCGCCGTGCCGGTGGTGCTGCTCGGCACTTTCGGCATCCTGGCGATCACCGGCTACTCGATCAACACATTGACCATGTTCGCCATGGTTCTCGCCATCGGCTTGCTCGTCGACGACGCCATCGTCGTCGTCGAGAACGTCGAGCGAATCATGAGCGACGAGGGCCTGCCGCCGCGCGAGGCGACGGAAAAATCCATGGGCGAAATCACCGGCGCCATCATCGGCATCGCTCTGGTGCTGACCGCCGTGTTCATTCCCATGGCCTTCTTCGGCGGCTCGACCGGCATCATTTATCGCCAGTTCTCGGTCACCATCGTTTCGGCCATGCTGCTCTCCGCGCTGGTCGCCATCGTGCTGACGCCGGCGCTCTGCGCCACGATGCTGAAACCGATCGACCATCACAAGAAGGGCCGAGGCCCGGCCGCCTGGTTCAACCGCGGCTTCGACGCAACGACGCGCGGCTATGTCGGCACCACCGGCGTCCTGCTGAAATGGCCGGTGACGGTCATCGCCGGCTTTCTGTGTATCGTCGGCGCCTGCGCCTTCCTGTTCACCAAGCTGCCCAGCTCCTTCTTGCCACAGGAAGACCAGGGCGTGTTGTTGACGATCATCCAGACGCCGACCGGCTCGACGACGCAACGCACCGAGGCCGTGCTGAAGAAGGTCGAGGACTACTTCCTCGAAAAGGAAAAGGGCAACATCACCGCGGTCTTCGGCGTGCTCGGCTTCTCCTTCTCCGGCACCGGCCAGAACAACGCCATCGTCTTCACCAAGCTGAAGGATTTCGCCGAGCGCAGGAATCCGGACCAGTCGGCGCAGGCGATCGTTGGCCGCGCCATGGGCTATTTCTTCACCTTGCGCGACGCCCAGGTCTTCCCGCTGGCCCCGCCTGCGATTCCCGGCCTCGGTACGTCGAGCGGCTTCTCCATGTATCTGGTCGATAGCGGCAAGCACGGCAACGACGCCCTGACCGAAGCCTCCAAGAAGCTCATCCAGCTCGGCAATTCCAGCGGAAGGTGGTGGCGCTGCGCTCCAACAGCCGCGATGCGGAAACGCAGATGA
PROTEIN sequence
Length: 713
MAHFFIQRPIFAWVIAIVIMLGGALAIFTLSTTVRITAAYNGASAETVEKSVTTLIEDGMTGLDDLTYMTSSSTTGSAEVSLTFGNSVNPDIAQVQVQNKLQLVQSQLPDVVQQAGITVSRSTSSILMVGALVSVDGKRSSVDLGDLVSSQIEDQIKRLEGVGSINIFGSGYAMRIWLDPFKLQKYQLTPADVTSAIQAQNTQVSVGSLGAQPLARGQQINITITAQSQLNTVSEFESIILKVEKDGATVRLSDVARIEIGEESYGGATRANRMPASGFAVNLATGANALDTAARVKDALSAIAPTLPHGVEIQYPYDTTPFVKLSIEKVVETLVEAIVLVFVVLLIFLQNLRATLIPMIAVPVVLLGTFGILAITGYSINTLTMFAMVLAIGLLVDDAIVVVENVERIMSDEGLPPREATEKSMGEITGAIIGIALVLTAVFIPMAFFGGSTGIIYRQFSVTIVSAMLLSALVAIVLTPALCATMLKPIDHHKKGRGPAAWFNRGFDATTRGYVGTTGVLLKWPVTVIAGFLCIVGACAFLFTKLPSSFLPQEDQGVLLTIIQTPTGSTTQRTEAVLKKVEDYFLEKEKGNITAVFGVLGFSFSGTGQNNAIVFTKLKDFAERRNPDQSAQAIVGRAMGYFFTLRDAQVFPLAPPAIPGLGTSSGFSMYLVDSGKHGNDALTEASKKLIQLGNSSGRWWRCAPTAAMRKRR*