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SCNpilot_expt_1000_bf_scaffold_4445_16

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 17092..17349

Top 3 Functional Annotations

Value Algorithm Source
CheW protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VL51_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 82.0
  • Bit_score: 126
  • Evalue 1.70e-26
CheW protein {ECO:0000313|EMBL:EJZ18385.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 82.0
  • Bit_score: 126
  • Evalue 2.40e-26
cheW; chemotaxis protein; K03408 purine-binding chemotaxis protein CheW similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 84.0
  • Bit_score: 124
  • Evalue 1.20e-26

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Taxonomy

Rhizobium sp. Pop5 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGGAGGCGGTGAAGGCCACCATCGACAGCCGCATTATCGTCATCGAAATGGAATTCGACGGCGAAATCAACCTGATCGGCATTCGCACCGACAAGGTGAACGAGGTGACGACGCTGGCAAGAACAGCGTCCGAGCTTCCGCCCAGCGTCGGCATGAAATGGCGGGCCGACTTCATTTCCTGCCTCGTCAAGCGTGGCACGGATTTCATCATTGTTCCCGATCTTGAAGTAATTTTTTCCACCCAGGCCGAAAAGTGA
PROTEIN sequence
Length: 86
MEAVKATIDSRIIVIEMEFDGEINLIGIRTDKVNEVTTLARTASELPPSVGMKWRADFISCLVKRGTDFIIVPDLEVIFSTQAEK*