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SCNpilot_expt_1000_bf_scaffold_4547_4

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 3073..4557

Top 3 Functional Annotations

Value Algorithm Source
gabD4; succinate-semialdehyde dehydrogenase [NADP+] GabD (EC:1.2.1.79) similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 491.0
  • Bit_score: 791
  • Evalue 1.70e-226
Succinic semialdehyde dehydrogenase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PXH0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 493.0
  • Bit_score: 808
  • Evalue 4.30e-231
Succinic semialdehyde dehydrogenase {ECO:0000313|EMBL:EKF57420.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 493.0
  • Bit_score: 808
  • Evalue 6.10e-231

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
ATGAGCATTTCCGAAACTCTCTCCTCGAAGCTGAAGGATCCTTCGCTGGCCGTCGACAAGGCGATGCTGGCCGGTGAATGGCTGTCGACCTCGGCCAGCGGCAAGACCTTCAACGTCACCAATCCTGCAAACGGCGATGTCATCGCCGTTCTGCCCAATCTCGGCCAGGCCGAGCTGAAGAAGGCGATCGACGCCGCCCATACCGCGCAGAAGGCATGGGCGAAGAAGACCGCCAAGGAGCGCGCCGTCATCCTGCGGAAGCTCTATGACCTCATGGTCGCCAATGCCGACGATCTCGCGACGATCCTGACCGTCGAAATGGGCAAGCCCTGGGCTGAAGCCCGCGGCGAGATCCTCTATGGCGCGTCCTATGTCGAGTGGTTCGGCGAGGAAGCCAAGCGCGTCTATGGCGATACGATCCCCGGCCACCAGGCGGACAAGCGCATTCTCGTCATCCGCCAGCCGGTGGGTGTCGTCGGCGCGATCACGCCGTGGAACTTCCCGAACGCCATGCTGGCCCGCAAGATGGCTCCGGCGCTTGCCGCCGGATGCACCATGGTTTCCAAGCCCGCCGCCCAGACGCCGCTTTCGGCGCTGGCGCTGGCGCTTCTGGCCGAACGCGCCGGCGTTCCCGCAGGCGTCTTCTCCGTCTTCACCTCGACGGAATCGGCGATGGTCGGCCAGGAAATGTGCACCAACGACAAGATCCGCAAGCTGACCTTCACCGGCTCCACCAATGTCGGCAAGATCCTGATGCGTCAGGGTGCCGAGCAGATCCTGAAGCTCGGCCTCGAACTCGGCGGCAATGCGCCGTTCATCGTCTTCGACGATGCCGATCTCGATGCGGCGGTCGAAGGCGCGATGGTGTCGAAGTATCGCAACAATGGCCAGACCTGCGTCTGCGCCAACCGTATCTATGTCCAGGCCGGCGTCTATGACGCGTTTGCCGAAAAACTCTCGGCCCGCGTCGCCAAGATGAAGGTCGGCGACGGCATGGGCGAGGGCGTTACCGCCGGTCCGCTGATCGACGAAAACGCCCTGAAGAAGGTCGAGGAACACGTTGCCGACGCGCAGTCCAAGGGCGCCAAGGTGGCGGCCGGCGGCAAGCGCCATCAGCTTGGCGGCCTGTTCTACGAGCCGACGATTTTGACGGGCGTCACCTCCGATATGATGGTCGCCCGCGAGGAAACGTTTGGCCCCGTCGCCCCCCTCTTCCGTTTCGAAACCGAAGAGCAGGTCGTGGAAATGGCCAACGACACGGAATTCGGTCTCGCCTCCTACTTCTATTCGAAGGACGTGGCCAAGATCTTCCGCGTCGCCGAACAGCTCGAATACGGCATGGTCGGCATCAACACCGGCCTGATCTCCACCGAAGTCGCCCCCTTCGGCGGCATCAAGCAATCCGGCCAGGGCCGCGAAGGCTCGAAATACGGTCTGGAAGACTACACCGAGCTGAAATACCTCTGCCTCGGCGGCATCGAGTAA
PROTEIN sequence
Length: 495
MSISETLSSKLKDPSLAVDKAMLAGEWLSTSASGKTFNVTNPANGDVIAVLPNLGQAELKKAIDAAHTAQKAWAKKTAKERAVILRKLYDLMVANADDLATILTVEMGKPWAEARGEILYGASYVEWFGEEAKRVYGDTIPGHQADKRILVIRQPVGVVGAITPWNFPNAMLARKMAPALAAGCTMVSKPAAQTPLSALALALLAERAGVPAGVFSVFTSTESAMVGQEMCTNDKIRKLTFTGSTNVGKILMRQGAEQILKLGLELGGNAPFIVFDDADLDAAVEGAMVSKYRNNGQTCVCANRIYVQAGVYDAFAEKLSARVAKMKVGDGMGEGVTAGPLIDENALKKVEEHVADAQSKGAKVAAGGKRHQLGGLFYEPTILTGVTSDMMVAREETFGPVAPLFRFETEEQVVEMANDTEFGLASYFYSKDVAKIFRVAEQLEYGMVGINTGLISTEVAPFGGIKQSGQGREGSKYGLEDYTELKYLCLGGIE*