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SCNpilot_expt_1000_bf_scaffold_4555_6

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 2710..4620

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 634.0
  • Bit_score: 1137
  • Evalue 0.0
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7) similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 634.0
  • Bit_score: 1125
  • Evalue 0.0
  • rbh
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CD97_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 634.0
  • Bit_score: 1137
  • Evalue 0.0
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1911
ATGCTGAGCACGCCGCTTCTCGACACGGTCAAGGTTCCCGCCGATCTGCGCAAGATCGACGACCGCGACCTGCCGCAGCTCGCCCGCGAGTTGCGCGACGAGATGATCGACGCCGTGTCGCGCACCGGCGGGCACCTGGGCGCCGGGCTGGGCGTCGTCGAGCTGACCATGGCGATCCACAAGGTCTTCGATACGCCCAACGACCGGCTGATCTTCGATGTCGGCCACCAGTGCTATCCGCACAAGATCCTCACCCGCCGCCGCGAACGCATCCGCACCCTGCGCCAGGAGGACGGCCTCTCCGGCTTCACCCGCCGGGCGGAGAGCGAATACGACCCCTTTGGGGCGGCGCATTCCTCAACCTCGATTTCCGCCGGCCTCGGCATGGCGGTCGCCGCCGAACTCAGCCAGACCGACCGCCGGGTCATCGCCATCATCGGCGACGGGGCGCTGTCGGCCGGCATGGCCTATGAGGCGTTGAACAATGCCGGCGCGCTCGACGCCCGGCTGATCGTCATCCTCAACGACAACGACATGTCGATCGCCCCGCCCACCGGGGCGATGAGCGCCTATCTCGCCCGCCTTGCCTCGGGTCGCACCTATATGGGATTCCGCGATTTCGGCAAGAAGCTGACCGCCTATCTCGGCAAGAACATCGACCGCGCCATCACCCGCGCCGTCGAGCATGCGCGCGGTTATGTCACCGGCGGCACCATGTTCGAGGAGATGGGTTTTTATCACATCGGCCCGATCGACGGCCATTCCTTCGAGCATCTGCTGCCCGTCTTGCGCAATGTGCGCGACAACCAGCGCGGGCCGGTGCTGATCCATGTGGTGACGCAGAAGGGCAAGGGGTATCCTCCTGCCGAGGCAGCGGCCGACAAGTATCATGGCGTCAACAAGTTCGACGTCATCACCGGCGCGCAGGCCAAGGCCAAGCCGAATGCGCCGAGCTATACCGCCGTCTTCGCCGATGCGCTGGTGGAAGAAGCCCGCCACGACGAAAAAATCGTTGGCATCACCGCCGCCATGCCCAACGGCACCGGGCTCGACAAGCTGGCGGAGATTTTCCCCAAGCGCACCTTCGATGTCGGCATCGCCGAGCAGCATGCCGTGACCTTCGCCGCCGGCCTTGCCACCGAAGGTTTCAAGCCGTTCTGTGCGCTCTATTCCACCTTCCTGCAGCGCGGTTACGACCAGGTGGTGCATGACGTGGCGATCCAGAAGCTTCCCGTTCGGTTTCCCATCGACCGCGCCGGTTTCGTCGGCGCCGACGGGCCGACCCATGCAGGCTCCTTCGACACCGGTTTCCTCGCCTCGCTGCCCGGTTTCGTGGTCATGGCGGCGGCCGACGAGGCGGAACTGAAGCATATGGTGCGCACCGCTGCTGCCCATGACGACGGTCCGATTTCCTTCCGCTATCCGCGCGGCGAAGGTGTGGGCGTCGACCTTCCGGTGCGCGGCGAAATTCTGCAGATCGGCAAGGGCCGCATCGTCAAGCAGGGCGCCAAGGTGGCGCTGCTCTCCTTCGGCACGCGCCTCGCCGACTGTCTGCTGGCGGCGGAAGATCTGGATGCCGCCGGCCTGTCGACGACGGTCGCCGATGCACGTTTCGCCAAGCCGCTGGATACCGATCTCATCCGCCAGCTTGCCCGCCACCACGAGGTGCTGATCACCGTCGAGGAAGGCGCGGTCGGCGGCTTCGGCTCCCAGGTGCTGCAATTCCTCGCCTTCGAAGGCCTGCTTGATCATGGCCTGAAGGTGCGTCCGCTGGTCCTGCCGGATCTGTGGATGGAACAGGCCAAGCCCGAGGTGATGTATGCCAAGGCCGGCCTCGACCGGTCCGGCATCGTCACCGCGGTCTTCCGGGCACTCGGCCAGAAACCGCTGGAAGTCGGCGCGGCCGGATAG
PROTEIN sequence
Length: 637
MLSTPLLDTVKVPADLRKIDDRDLPQLARELRDEMIDAVSRTGGHLGAGLGVVELTMAIHKVFDTPNDRLIFDVGHQCYPHKILTRRRERIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAAELSQTDRRVIAIIGDGALSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFEHLLPVLRNVRDNQRGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPSYTAVFADALVEEARHDEKIVGITAAMPNGTGLDKLAEIFPKRTFDVGIAEQHAVTFAAGLATEGFKPFCALYSTFLQRGYDQVVHDVAIQKLPVRFPIDRAGFVGADGPTHAGSFDTGFLASLPGFVVMAAADEAELKHMVRTAAAHDDGPISFRYPRGEGVGVDLPVRGEILQIGKGRIVKQGAKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDTDLIRQLARHHEVLITVEEGAVGGFGSQVLQFLAFEGLLDHGLKVRPLVLPDLWMEQAKPEVMYAKAGLDRSGIVTAVFRALGQKPLEVGAAG*