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SCNpilot_expt_1000_bf_scaffold_6458_10

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 6545..7906

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhizobium sp. CF080 RepID=J2R697_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 379.0
  • Bit_score: 320
  • Evalue 3.30e-84
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:CDN47914.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 379.0
  • Bit_score: 320
  • Evalue 3.50e-84
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 285.0
  • Bit_score: 307
  • Evalue 9.00e-81

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Taxonomy

Neorhizobium galegae → Neorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGGACGTGCAACCATCCCGATCTGACATCGGCGCAGCAGGGAAAAACGGTTCCGGCTCTACGGAAGACGGATTCGATCTGCTGGACTCTGCGCCCGTTCCACTGGCGCTCGTCACCCTCGAAGGTGACATCCTGCGGGCCAATACCGGATTTTTCAGGCTTGCCGATGGTCGTGCGGCGAATGCTTCCGGTCTGGCCGAACTGGTTTTTCCAGAAGATCGCGATCGACTGTTTGCCTGGCTCAAAGACGGAATTTCGGGTGAAACGGCGGAATTTCGACTTGCGGGGGGCTCATTCTGGGTTTCGGCCTCGGTGTCCCCGGCTGATGACGAGACTGCTCGTCTCCTCGCTCTCACGGATATTACCCAGCTCAAGCGTGAGGTCCAAGACCTCGCCATGCGTGAGCGGCGCTGGCATGATGCGTTGACCAATTCCGGACTCGGCGTCTGGGACCAGAATTATGGCGCCGGCGTCATGTATTATTCCGATACCTGGCGCGCCATCCGCGGCATCGGCCCGGACGAGACCCTGAACGAAGGCATGGACGACTGGATCCTGCTGGTCCATCCCGACGACCGCGCATTCGTCATCGACGCTATCCACCGCCAGAACCGCGGCGATCCGGATTTCGCCGTCTTCCAATATCGCGAGCGCAACCGCGGGGGCGGCTGGGTCTGGATTGAATGCCGCGGTGCGGCCGTCGAGTGGGACGATGACGGTAATCCGCTGCGTGTCGTCGGCACCGATACCGACATCACGGCCCGCAAGCTTGCCGAGGAATTGCTGGCTGGCATGTCGCGCCGGCTGAAGCTGGCTTTGTCGATCTCCAAGATCGGTGTCTTCGAAGTCGACCTGCAGAGCCAGACGGTTCATTGGGATGACGGCCTTCTGAAAATGTTCGGCATGGAGGGCACATCCAACACCAAGCCGGAATCGCTTTGGGAATCGCTCATCCATCCCGACGACCGTGCAGCGACGCTGCGCCGCGTCTCCATGCATATTGAGCATGATGGCGAATTCGAGAACGATTACCGCGTGTTGCTTGCCGAGGGCTGTGTGCGCCATATTCGCTCGCGCAACGTCGTCTTCACCGACAATGCCGGCCGGCGGTATATGCCCGGCGCCAATTGGGACGTGACCGCCGACGTCAACCTGCGCCCTGAGTTGCTCAACGCCGCATCGAGCACAATGCGCTGCACGACTATCTCACCGGCCTGCCGAACCGGCGTTACATGGACGAAATGCTGGAAATGCGCGCGGCCGAATGCCATGTCACCGGCGCCAGCATCGCCGTGCTGCACATCGATCTCGACCGCTTCAAGCAGATCAATGACACGTTGGGGCATCTGGCAGGCGACATGA
PROTEIN sequence
Length: 454
MDVQPSRSDIGAAGKNGSGSTEDGFDLLDSAPVPLALVTLEGDILRANTGFFRLADGRAANASGLAELVFPEDRDRLFAWLKDGISGETAEFRLAGGSFWVSASVSPADDETARLLALTDITQLKREVQDLAMRERRWHDALTNSGLGVWDQNYGAGVMYYSDTWRAIRGIGPDETLNEGMDDWILLVHPDDRAFVIDAIHRQNRGDPDFAVFQYRERNRGGGWVWIECRGAAVEWDDDGNPLRVVGTDTDITARKLAEELLAGMSRRLKLALSISKIGVFEVDLQSQTVHWDDGLLKMFGMEGTSNTKPESLWESLIHPDDRAATLRRVSMHIEHDGEFENDYRVLLAEGCVRHIRSRNVVFTDNAGRRYMPGANWDVTADVNLRPELLNAASSTMRCTTISPACRTGVTWTKCWKCARPNAMSPAPASPCCTSISTASSRSMTRWGIWQAT*