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SCNpilot_expt_1000_bf_scaffold_6458_11

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 7906..9066

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhizobium sp. CF080 RepID=J2R697_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 381.0
  • Bit_score: 511
  • Evalue 8.60e-142
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EUB95675.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 381.0
  • Bit_score: 511
  • Evalue 1.20e-141
sensory box/GGDEF family protein similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 386.0
  • Bit_score: 494
  • Evalue 3.40e-137

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
ATGCTGCAGCATGCCGCGGCCGTGTTGCGGGCAAACATCCGCGAGGAGGATTTCGTCGCCCGCATCGGCGGCGATGAATTCGTCGTGCTGACCCGCGGCGACGGTTCCCAGCGCAAGCTGGCGCTGTTTGCCGACCGGATCATCCGGGAATTGTGCAAGCCGGTCGCTTTCGAGGGGCATATGATTCGTTTTGGCGCCAGCATCGGCATCGCCGTGGGCGGCGGCGCCGACGCCGATGCCAAGCAGGTGCTGCTGAACGCCGATATCGCTCTCTACCGCGCCAAGAATCGCGGACGCAACCGCCATGAATTCTTCTCGCAGGACACGCAGAACCAGATCATCCGCCACAAGCAGATCGCCGACGAGATCCTGCAGGCGCTGGAGCAGGATCAGTTCGTTCCCTATTACCAGCTCCAGTTCAACGCCCGTACGCTTGACGTCGCCGGTGTGGAGACGCTGGTGCGTTGGCGCCATCCCGAGCGCGGCATTCTGACGCCGGATAACTTCCTCGCCATTGCGGACGATCTCGACGTGGTCTCGACCATCGACGCCATGGTGCTGGAAAAGGCGCTGAAGGCTCTGCAAATCTGGGAAAGCCGTGGGCTTTTGGTGCCGAAGGTCTCGGTCAACGTCTCCACACGGCGCCTGAACGACCCCGCCCTGATGACCAAGCTGAAGCGCTTGAAAATCCGGCCGGGAACCGTGTCCTTCGAGCTTCTGGAAACGATCTTCCTCGATAATTGCGATTCAGGCGTCATCTCCAACCTGGAGCGGCTGCGGAAGCTCGGCATCGGCATCGAGATCGACGATTTCGGCACCGGCCATGCCTCGATCGTCAGTCTGATGCGCATCAGCCCCAACACGCTGAAGATCGACCGGCAGATCATCAATTCCGTGCATCGTTCCGCCGAACAGCGCAAGCTGGTCGGCGCGATCGTCGAGATGGGGCGCGCGCTCAACATCCAGGTCGCGGCCGAGGGTGTGGAAACGACAGACCATATCCGCGTATTACGCGAGACAGGTTGCGATATCCTGCAAGGTTACGGCCTGGCCCGGCCCATGCCGTTTGCCGAAATCGAAGGGTTTCTGCGCGCCGAAAGCTGGCGGGCCGGCACCAATGCCGTCAAGGACCTGCAGAATCGCGTCCGGCGCGCAACGTAG
PROTEIN sequence
Length: 387
MLQHAAAVLRANIREEDFVARIGGDEFVVLTRGDGSQRKLALFADRIIRELCKPVAFEGHMIRFGASIGIAVGGGADADAKQVLLNADIALYRAKNRGRNRHEFFSQDTQNQIIRHKQIADEILQALEQDQFVPYYQLQFNARTLDVAGVETLVRWRHPERGILTPDNFLAIADDLDVVSTIDAMVLEKALKALQIWESRGLLVPKVSVNVSTRRLNDPALMTKLKRLKIRPGTVSFELLETIFLDNCDSGVISNLERLRKLGIGIEIDDFGTGHASIVSLMRISPNTLKIDRQIINSVHRSAEQRKLVGAIVEMGRALNIQVAAEGVETTDHIRVLRETGCDILQGYGLARPMPFAEIEGFLRAESWRAGTNAVKDLQNRVRRAT*