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SCNpilot_expt_1000_bf_scaffold_1147_16

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 49 / 55 MC: 6 BSCG 50 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(15339..16679)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF0A28 related cluster n=1 Tax=unknown RepID=UPI0003CF0A28 similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 445.0
  • Bit_score: 747
  • Evalue 1.10e-212
  • rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:ESY74225.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 445.0
  • Bit_score: 747
  • Evalue 1.50e-212
MATE efflux family protein similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 446.0
  • Bit_score: 738
  • Evalue 1.60e-210
  • rbh

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
TTGAACGAGGGACCGACCCAAGCCACCGCGAGACATTTCATCGTCACCAACAGATCGGTGCTGGCCATCGCCGTGCCGATGACGCTCGCCTATCTGACGACGCCGCTTCTCGGCATTGTCGACACGGCGGTGGTCGGCCAGTTCGGCGACGCCGCGCTGCTCGGCGGCCTTGCCGCCGGCGCGCTGGCGTTCGACCTGGTCTTCACCACCTTCAACTTTCTGCGCTCGGGAACGACGGGCTTGGTCGCGCAAGCCTTCGGACGGGGCGACCAGTTGGAGGAGCAGGCGGTGTTCTGGCGTGCCGTGCTGGTCGCGGTCGTCGCCGGGGTCATATTGGCTGCGCTGGCTCCGCTCCTTGCCGAGGCCGGTCGATGGTTCATGGGTGCGGGCCCTCGTGTCAGCGAGGCGATGAGCGTCTACATCCACATCCGCATGCTGGCCACGCCCTTCTCGCTGATCAATTACGCCGTGCTCGGTTATGTGCTGGGCAGGGGTGAGGGCAGGCTCGGCCTGATGCTCCAGGCGGTGCTCAACGGCGTCAACATAGTGCTCTGCTTCCTGCTCGGGCTGGAGCTCGGCTGGGGCGTCGCCGGTGTCGCCTGGGCAACGGTCATCGGCGAGTTCGCCGCCACCATCCTGGGCCTAGCGATCGTCATCCGGCGGTTCCGGTCAGCCCCGCCATTGCCGCGCGGCCGGATCCTCGACATGCCGGCCTTGCGGCGCATGCTGTCGCTCAACCGCGACATCATGATCCGCTCCTTCTCGCTGCTTGCCGCTTTCGCGCTGTTCACACGTCAGGGCGCGCAGTTCGGTACGGTGACGCTCGCCGCCAATGCGGTGCTGATGAATTTCTTCCTCATCGCCGGCTATTTCCTCGACGGCTTCGCCACCGCCGCCGAACAGCTCGCCGGCCGCGCCATCGGCGCCCATGCCGCGGCCCCCTTCCGTCAGGCCGTGCGGCTGACGCTGATCTGGGGGTTCGGCCTCGCGGCTACTGCGACGCTGGTGCTGCTGTTCGGCGGCGCCCCTTTGGTCGCGCTGGTCACGACGTCAGCGGAGGTACGTTCCGTCGCCGATACCTATCTGCCATGGGCCGCGTTCACGGCGTTGAGCGGCGTGCTGGCCTTTCAGATGGATGGCGTCTTCATCGGCGCGACGTGGTCGCGAGACATGCGCAACATGATGCTGCTGTCGTTGCTGGCCTTCGTCGCCGCGCTGGTCTCGCTGGCCCCGGCTTTCGGCAACAGCGGCCTCTGGGCGGCACTGCACGTCTTCCTGCTGACCCGTGGCTTCAGCCTGTTCGCCATACTCAGGTTGCGGGTTCGCACAGCCTTCAGCTGA
PROTEIN sequence
Length: 447
LNEGPTQATARHFIVTNRSVLAIAVPMTLAYLTTPLLGIVDTAVVGQFGDAALLGGLAAGALAFDLVFTTFNFLRSGTTGLVAQAFGRGDQLEEQAVFWRAVLVAVVAGVILAALAPLLAEAGRWFMGAGPRVSEAMSVYIHIRMLATPFSLINYAVLGYVLGRGEGRLGLMLQAVLNGVNIVLCFLLGLELGWGVAGVAWATVIGEFAATILGLAIVIRRFRSAPPLPRGRILDMPALRRMLSLNRDIMIRSFSLLAAFALFTRQGAQFGTVTLAANAVLMNFFLIAGYFLDGFATAAEQLAGRAIGAHAAAPFRQAVRLTLIWGFGLAATATLVLLFGGAPLVALVTTSAEVRSVADTYLPWAAFTALSGVLAFQMDGVFIGATWSRDMRNMMLLSLLAFVAALVSLAPAFGNSGLWAALHVFLLTRGFSLFAILRLRVRTAFS*