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SCNpilot_expt_1000_bf_scaffold_11476_2

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 49 / 55 MC: 6 BSCG 50 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 483..1286

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=3 Tax=Pseudomonas putida RepID=A5W231_PSEP1 similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 252.0
  • Bit_score: 293
  • Evalue 2.50e-76
Oxidoreductase {ECO:0000313|EMBL:KIY37667.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 252.0
  • Bit_score: 294
  • Evalue 2.10e-76
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 252.0
  • Bit_score: 293
  • Evalue 8.00e-77

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Taxonomy

Pseudomonas sp. 10-1B → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGAACATCAACCCAGCGTCGATGATCCATCCGAACCGCAGCCGGTTCGTGGACCGACATGTCCTGGTATCGGGCGGCGCCGCGGGTGTCGGCGCCGAGGCGGTCCGGCTGTTCGCCGCCGAGGGCGCCCGGGTCAGCATCGTCGACATTCAGGATGCGGCGGGCACGGCCCTGACCGAGGAGGTGATGGAGGCGGGCGGTGAGGCGATTTTCGTGCGCGCCGACGTTTCCAGCGGCCAGGAGGTGAGCCATGCCCTGGGCGTCGCCAACGAACGATTCGGAACCGTCGATATCCTCTACAACCATGCCGGTTCCACGATCGTGAAGCCGTTCCTCGACACCAGCTACGAGGAGTGGCGGCGCCTGTTCGCCATCAACGTCGACTCCATGTATTTCATGACGCACGGCGTGCTTCCGGGCATGCTTGCCAAGGGAAAGGGCGTGATCGTCAACACCTCCTCGGTCTCGGCCGTCCTCGCCACGCCCATGGAGGTCCTCTATTGCACCAGCAAGGGCGCCTGCCAGATGTTCACCCGCTCGATCGCCACCGAGTATCGCGACCAGAACATACGCTGCAACGCCGTCTGCCCAGGTTTCATCCGTACCGCGCATGGCCTGCGCGAGATCGATGCCCTGAAAGCCTACGGCGTCGATGTGACAGAGGCGGCGATCGCCGAGTTGCAGGGCCGGATCTGCGAGCCGGTCGAGATCGCGCGCGCCGCCCTCTTCCTTGCTAGCGACGATGCCAGCTTCGTCAATGGCGAAACGCTTTATGTCGATAATGGCCTGATGGCCCGTACCTGA
PROTEIN sequence
Length: 268
MNINPASMIHPNRSRFVDRHVLVSGGAAGVGAEAVRLFAAEGARVSIVDIQDAAGTALTEEVMEAGGEAIFVRADVSSGQEVSHALGVANERFGTVDILYNHAGSTIVKPFLDTSYEEWRRLFAINVDSMYFMTHGVLPGMLAKGKGVIVNTSSVSAVLATPMEVLYCTSKGACQMFTRSIATEYRDQNIRCNAVCPGFIRTAHGLREIDALKAYGVDVTEAAIAELQGRICEPVEIARAALFLASDDASFVNGETLYVDNGLMART*