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SCNpilot_expt_1000_bf_scaffold_1551_21

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(21614..21934)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein (Fragment) n=3 Tax=mine drainage metagenome RepID=T0YGB3_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 105.0
  • Bit_score: 122
  • Evalue 2.40e-25
Ribosome hibernation promoting factor HPF {ECO:0000313|EMBL:GAN45858.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 97.0
  • Bit_score: 129
  • Evalue 2.10e-27
ribosomal subunit interface protein; K05808 putative sigma-54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 104.0
  • Bit_score: 112
  • Evalue 1.00e-22

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Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGCAAATCCAGGTCAGCGGTCACCAGATCGAAATCACCCCGGCCCTGCGCGATTACGTCGATGCGCGCCGCGAACGCCTCGCGCGCCGTTTCGATCACCTGACTTCGCTCAACGTGGTGCTGGAAGTGGAGAAGAATCGTCTGGCCAATCGCGCGGAAGCGACGCTGGCCGCAGCCGGCAAGGTCCTGCACGCGGATGCGGTGGACAACGACATGTACGCCGCGATCGACGCGTTGTTCGACAAGCTCGATGCCCAGGTCCGCAAGCACAAGGACAAGCGGCGCACGCACGGGCGAGATGACATCAGGGACCTCGCCTAG
PROTEIN sequence
Length: 107
MQIQVSGHQIEITPALRDYVDARRERLARRFDHLTSLNVVLEVEKNRLANRAEATLAAAGKVLHADAVDNDMYAAIDALFDKLDAQVRKHKDKRRTHGRDDIRDLA*