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SCNpilot_expt_1000_bf_scaffold_2258_8

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 5994..6218

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RWY8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 68.0
  • Bit_score: 111
  • Evalue 5.00e-22
cspD; Cold shock protein CspD similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 64.0
  • Bit_score: 110
  • Evalue 2.70e-22
Tax=RBG_16_Betaproteobacteria_64_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 64.0
  • Bit_score: 111
  • Evalue 5.40e-22

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Taxonomy

RBG_16_Betaproteobacteria_64_18_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 225
ATGGCAGTGGGTACGGTGAAGTGGTTCAACGATGCCAAGGGCTTCGGTTTCATCACGCCCGATGGCGGTGGCACGGACGTGTTCGTGCATTTCTCGGCGATCAAGGCACAGGGCTTCCGCAGCCTCAAGGAAGGCCAGCGCGTCAAGTTTGAGATCGTGCAGGGTCCGAAGGGCATGCAGGCGTCGGAAGTGACCGGCGAGGGCGAAACCGCGTCGGCAGCCTGA
PROTEIN sequence
Length: 75
MAVGTVKWFNDAKGFGFITPDGGGTDVFVHFSAIKAQGFRSLKEGQRVKFEIVQGPKGMQASEVTGEGETASAA*