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SCNpilot_expt_1000_bf_scaffold_2274_23

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 21305..21853

Top 3 Functional Annotations

Value Algorithm Source
MscS mechanosensitive ion channel n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTU4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 181.0
  • Bit_score: 286
  • Evalue 1.60e-74
MscS mechanosensitive ion channel {ECO:0000313|EMBL:EIL90635.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 181.0
  • Bit_score: 286
  • Evalue 2.30e-74
mechanosensitive ion channel MscS; K16053 miniconductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 179.0
  • Bit_score: 186
  • Evalue 9.40e-45

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGTCGAAGTCGTATCGCAACTATCGCTACATGTATGCGACCGGGCGACGCATCCGCCGCGCGGTCAACATCGATCTCACCACCGTGCGATTCCTGGAACCTGACGAAATCGAAAATTTGCGCCGGTTCCGCCTGCTCGACGATTACTTCGAGCGCAAGCAGAAGGAGCTGGCCGAGTGGAACGCCGGGCTCGGCGATGCGGGCAAGCTTGCCGTCAACCAGCGCCGCCTCAGCAACCTCGGTACTTTTCGCGCCTACATGCAGGCCTACGTGGCGGCGACGCCGACGGTCAACCCCGACCTGTTCTGGGCCGTGCGCCAGCTCGATCCCGGCCCCGACGGCATCCCTTTGCAGGTGTATGGCTACACGGTGGATACGGGTTTCGTGGCCCACGAGAACGCCACCGGCGACATCTTCGATCATTTGATTGCGATCCTGCCCGAGTTCGGACTGAAGTTGTTCCAGCAGCCGACGGGCAGCGACATTCGCGCGGGATTGTCGGGTGTTCGCCGAGGGGACCTGTCCATGGCATCCGCAGAGGCGCCATAG
PROTEIN sequence
Length: 183
MSKSYRNYRYMYATGRRIRRAVNIDLTTVRFLEPDEIENLRRFRLLDDYFERKQKELAEWNAGLGDAGKLAVNQRRLSNLGTFRAYMQAYVAATPTVNPDLFWAVRQLDPGPDGIPLQVYGYTVDTGFVAHENATGDIFDHLIAILPEFGLKLFQQPTGSDIRAGLSGVRRGDLSMASAEAP*