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SCNpilot_expt_1000_bf_scaffold_4022_13

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 12535..13188

Top 3 Functional Annotations

Value Algorithm Source
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 198.0
  • Bit_score: 274
  • Evalue 1.40e-70
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBL5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 198.0
  • Bit_score: 274
  • Evalue 9.90e-71
chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 198.0
  • Bit_score: 267
  • Evalue 2.90e-69

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGCGTCTGGCGTCCGTCCCCGGCATCCAGCGAACCGGTGCGCGCGCGGTGGCGCGCGGGTTCGAACACCTGCTTCGCTTGCACGAAGCGGGCACGGGCCGGGTGTCGGTGAAGATCCTGCCCGGCGAGTATTACGCCACGGCGCAGGATGAAGTCATCACCACCGTGCTGGGCTCGTGCGTGTCGGCCTGCATCCACGACCCCGAAGCGAGGGTCGGCGGCATGAACCATTTCATGTTGCCCGAGCCTTCCGCCCGCCGCGGGCGCTGGGGCGACACCGCAGCCGGACGCTCGGCGCGTTACGGCAGCGACGCCATGGAACAACTGGTCAACACGGTGCTGAAGGCCGGTGGCGAACGCGGCCGGCTGCAGGTGAAGATTTTCGGTGGCGGGCGCGTCCTTGCGCGGATGACCGACATCGGCGCGCGCAACGTCGATTTCGTGCGCCGCTACCTCGACGCGGAATCGCTGCTGCTGGCGGCCGAGGACGTCGGCGGCGAGCGACCGCGCCAGGTCCGCTTCTATCCGGTGTCCGGGCGCGCGCAGGTGCGGCGCCTGAACGGCCTCGACGACGTCGGCCTCGCCGATCGCGAGCGCCGCTACCTCAAGCAACTCGCGAACGATCCGATAAAGGGTGAAGTGGAATTGTTTTGA
PROTEIN sequence
Length: 218
MRLASVPGIQRTGARAVARGFEHLLRLHEAGTGRVSVKILPGEYYATAQDEVITTVLGSCVSACIHDPEARVGGMNHFMLPEPSARRGRWGDTAAGRSARYGSDAMEQLVNTVLKAGGERGRLQVKIFGGGRVLARMTDIGARNVDFVRRYLDAESLLLAAEDVGGERPRQVRFYPVSGRAQVRRLNGLDDVGLADRERRYLKQLANDPIKGEVELF*