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SCNpilot_expt_1000_bf_scaffold_3579_9

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(8191..9000)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide core biosynthesis glycosyltransferase n=2 Tax=mine drainage metagenome RepID=T1ATK6_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 253.0
  • Bit_score: 388
  • Evalue 7.60e-105
  • rbh
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:GAN45021.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 251.0
  • Bit_score: 398
  • Evalue 6.10e-108
lipopolysaccharide core biosynthesis glycosyl transferase similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 255.0
  • Bit_score: 363
  • Evalue 8.30e-98

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Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
CGGGCATTACACTCGCTGAATCCACGCGCCTGTCCAACCGCCATGTCCGAACGCCCCCGCATCTCGGCTTGCGTCATCACCCTGAACGAAGCCGACCGCATCGGCGCCTGCCTCGCCTCGCTGGCGTTCTGCGATGAACTGGTGGTGGTCGATTCGGGCTCGACCGATGACACCCGCGCGGCTGCGACGGCGCGCGGCGCGCGGGTCATCGAACATGCCTTCGAGGGCTTCCGCACGCAAAAGGATTTCGCGGTGGCGCAGGCGCGGCACGACTGGGTGTTGTGCCTGGATGCCGACGAGCGCGTGACGCCGGCGCTGCGCGCCTCGATCGAAGCCGCGCGCGACGCCGGTTTCGCCGGTGCCGCCGGTTATCGCTTCGCGCGTTGCACCGAGTACTTCGGCGCCTTCCTGCGCCACGGCAACGCCTATCCCGATCGCGTGTTGCGGTTGTTCGATCGGCGCCGCGGCGGTTGGCGCGCGGGCCGCGAGATCCACGAACACGCCGTGGTCGAGGGCAACGTGGCGATGCTCGCGGGCGACCTGGAACATCGCGCCTACCGTTCGCTGGACGACCAGCTCGCCCGCTATCGCCGCTATGCGGCGATGATGGCGGTCGACATGCATGCGCGCGGCCGGCGCGGGCGCCTGCGCAACCTGGTGGTGAATCCCGCGTGGCGATTCCTGCGCGGCTATGTGCTGCGCGCGGGCTTCCGGGACGGCTGGCGCGGCTTCCTGTTCGCCTGCATGGAAGCCGACTATGTGCGCGAGAAATTCGCGCGGCTGTGGTTGCTGCAGCATGGCGGCCGGTGA
PROTEIN sequence
Length: 270
RALHSLNPRACPTAMSERPRISACVITLNEADRIGACLASLAFCDELVVVDSGSTDDTRAAATARGARVIEHAFEGFRTQKDFAVAQARHDWVLCLDADERVTPALRASIEAARDAGFAGAAGYRFARCTEYFGAFLRHGNAYPDRVLRLFDRRRGGWRAGREIHEHAVVEGNVAMLAGDLEHRAYRSLDDQLARYRRYAAMMAVDMHARGRRGRLRNLVVNPAWRFLRGYVLRAGFRDGWRGFLFACMEADYVREKFARLWLLQHGGR*