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SCNpilot_expt_1000_bf_scaffold_7103_17

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 18074..18658

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 n=1 Tax=Dyella japonica RepID=UPI00031DD4C8 similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 188.0
  • Bit_score: 296
  • Evalue 2.20e-77
RNA polymerase sigma70 {ECO:0000313|EMBL:AIF46950.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 188.0
  • Bit_score: 296
  • Evalue 3.10e-77
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 190.0
  • Bit_score: 294
  • Evalue 2.00e-77

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Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGACCGAAGCCAGAGACGAGATCGATTCACGCGACCGCCTGCTGCTCCAGCGCATGGCGGCAGGCGATCGCGCCGCGCTGGAAACGCTCTATCGCGCCTATCACGGCGGCATGTGCCGTTTCCTGTCGCGGTTGACGCGGCGCGCCGACCTGATCGAGGAAGTCATCAACGATTGTTTCTGGGTGGTCTGGCGCAAGGCGGATGGTTTCCAGGGCGACTCGCGTGTTTCCACCTGGCTGATGGGCATCGCCTATCGCTGCGGACTCAAGGCGCTGCGCCAGCGCGGCGACGAACCCGTGGACGATTACGCGTTGCGGGAAGGGCGTGGACCGTCCCACGACCCCGACGAGGATCGCCAATTGCGCGACTGGCTGGGCAAGGCACTCGAGCACCTGTCCGCGGATCAACGGCTCGTGGTCGAACTGGTTTACGGGGTCGGCAACAGCCTGGAAGAGGTTGCCGCGATCATGCAGGCGCCGGTCGGTACCGTGAAGGCACGTTTGTTCCACGCGCGCATCAAGTTGCGCAACGTGCTTCCGGTGCTCGCGGGGGAATCGCCTGCACAACGAGGGAAGTTGTCATGA
PROTEIN sequence
Length: 195
MTEARDEIDSRDRLLLQRMAAGDRAALETLYRAYHGGMCRFLSRLTRRADLIEEVINDCFWVVWRKADGFQGDSRVSTWLMGIAYRCGLKALRQRGDEPVDDYALREGRGPSHDPDEDRQLRDWLGKALEHLSADQRLVVELVYGVGNSLEEVAAIMQAPVGTVKARLFHARIKLRNVLPVLAGESPAQRGKLS*