ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1386_15

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 15669..16613

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WFB8_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 314.0
  • Bit_score: 545
  • Evalue 4.40e-152
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 314.0
  • Bit_score: 543
  • Evalue 4.00e-152
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEB83968.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 314.0
  • Bit_score: 543
  • Evalue 1.80e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGGAACTGCGACACCTGCGATGCTTTTTGGCTGTAGCCGAAGAACTGCACTTCGCCCGAGCAGCGGAGAAGTTGCATATTGAGCAATCGCCGTTGTCGCGTGCCATCAAGGAGCTGGAAGAGGAACTCGGCGTGGTGCTGTTCGCCCGCACCACGCGCAGCACGCGGTTGACCTGCGCGGGCAAGCTGTTTCTGGATCATGTTCCGCGTGTATTCAACGCCTTGCAGCAGGCCCGTGACAGCGTGAAGGCTGCCGCCAACGGCTTCCACGGCCAGTTGCGCATCGCACTTTCTGATGGCATTACACCTTCGCGTCTGCCGGCCTTGTTGGCGCTCTGCCGGCAAGAAGAACCCGAGGTTGAAATCCGCTTCTTCGAGGTGCCACTGTCGCAGCAAATCAAGGGGCTGCATGACGATCTGTACGACCTGGGATTCGCGCAGTCCGATGAGGTGGGCGACGGTATCGTCGCTATCCCCGCCTGGAGCGATGCGCTCATGGTGGCAGTGCCAGCACGGCATCCGCTGCTGGCCCACAAGCGCATTCCCCTCGATGAACTGCTGCGCTATCCGCTTGTCCTGTGTGATCCAAAGGTATGCGAAGGGCCTGCCAGACACTTTGATCGGATACTGCGTCGGGTGGACATGGAGCCATTGGTCGCAGAACGAGTCGCATCATGCGACCTGATGATGACGCTGGTGTCAGCCGGCTTCGCACTCGGATTCGCGGGTGCGGCACGCATTGCCGCCAGTCCTGAATCTGGCGTGGTAGCCCGACCACTGGCGCTGGGCGTACCGCCATTGACGACCTACCTGCTGTGCCCCGAAGGCAAGCCGTCCGATGTGCTGACACGTTTCATCGATCGCGTGCAGGCCATCGAGTCACCGGAATCCCCAAGGCCCACGCCGGGCCATCAATCCGATTCCCTGGAGGAACCTGCGCCATGA
PROTEIN sequence
Length: 315
MELRHLRCFLAVAEELHFARAAEKLHIEQSPLSRAIKELEEELGVVLFARTTRSTRLTCAGKLFLDHVPRVFNALQQARDSVKAAANGFHGQLRIALSDGITPSRLPALLALCRQEEPEVEIRFFEVPLSQQIKGLHDDLYDLGFAQSDEVGDGIVAIPAWSDALMVAVPARHPLLAHKRIPLDELLRYPLVLCDPKVCEGPARHFDRILRRVDMEPLVAERVASCDLMMTLVSAGFALGFAGAARIAASPESGVVARPLALGVPPLTTYLLCPEGKPSDVLTRFIDRVQAIESPESPRPTPGHQSDSLEEPAP*