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SCNpilot_expt_1000_bf_scaffold_2128_8

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 5126..5617

Top 3 Functional Annotations

Value Algorithm Source
nsrR; HTH-type transcriptional regulator NsrR id=12493232 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 164.0
  • Bit_score: 322
  • Evalue 2.40e-85
  • rbh
HTH-type transcriptional regulator nsrR {ECO:0000313|EMBL:CBI09185.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 139.0
  • Bit_score: 178
  • Evalue 6.00e-42
nsrR; HTH-type transcriptional regulator NsrR similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 134.0
  • Bit_score: 153
  • Evalue 7.90e-35

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 492
ATGCGCCTGACCAAGTTCACGGACTATGCCTTGCGGGTCGTCATGTATCTGGCGCGCCATCCGGACGGTCTGGCCACGATTGCCGACATCGCGCGCGAATACGACATTCCTTCCACTCACCTGATGAAAGTGGTGCACCGTCTTGCACAATGCGGCTACATCGTGACCGTGCGCGGAAAGGGGGGCGGCATGCGGCTCGCCCGGGCACCCGCCCTGATCAACGTGGGCGAGCTGGTACGGGATACCGAAGACAACATGGATATCGCCGAATGCTTCAGCGACGAAAATCAGACCTGTCCGATGCTGCCCGCCTGCACGCTCAGATCCATCCTGATCGAAGCTCGCAAAAGCTTTCTGGCCACCCTGGATTTTTATCGCCTGTCGGACATCATGGATCATCCCATGGCATTACATGCCGCCTCATTGCGCCCGCTACCTGACAGCCCGGTTCGCATGAGCCCCCCCGCAAAAACCGGCAAGGGAACAGCCTGA
PROTEIN sequence
Length: 164
MRLTKFTDYALRVVMYLARHPDGLATIADIAREYDIPSTHLMKVVHRLAQCGYIVTVRGKGGGMRLARAPALINVGELVRDTEDNMDIAECFSDENQTCPMLPACTLRSILIEARKSFLATLDFYRLSDIMDHPMALHAASLRPLPDSPVRMSPPAKTGKGTA*