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SCNpilot_expt_1000_bf_scaffold_2128_9

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 5741..7138

Top 3 Functional Annotations

Value Algorithm Source
outer membrane efflux protein id=12493231 bin=THIO_HI species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 466.0
  • Bit_score: 890
  • Evalue 8.20e-256
  • rbh
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 447.0
  • Bit_score: 482
  • Evalue 1.60e-133
  • rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 466.0
  • Bit_score: 713
  • Evalue 1.50e-202

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1398
ATGCGGCTCAAGAAAATCAAACCGGCGCATCTGAAAACACTGGTTTTGCTGATTCTGTTGCCCACGGCCGGCGCAGCCACGGCGGACACGCTGGATTTCACCCAGGCCGTGCAGCGCGCACTGTCGCAAAATCCGGACATCCTCATCGCCGGCACGCAAATCGGACAGGCCGAGGCTGCGGTCAGACAAAGCGAAGGCGCGCGCCTGCCCAAGCTGGCCGTCTCGGTCAATGTCACGCGCACCGATGATGCGCTCAATGCCTTCGGGCTCAAGCTGTCACAGCGCAGCGCCACGTTCAACGACTTCGGCGCGGGCGAATTCAATCCCGCCAACCCCAATGTCCTCAATATCGCACCGCGGGATCTCAACCATCCCGACCCGGTCAACAACTTCAATACCCGTCTGGAAGCGCAGTTACCGTTGTATACCGGCGGCATGATCGAAGGCTACAACGAGCAGGCCAGGGCGTATTTGCGGGCGGCCCGACAGGGCGATACGCTGGCGCGCCAGAAAGTGATTTTCGATGTGCTGCGCGCGTACGAGGGGGTGCATACCGCGCGCGCCTATGCGGATGTCGCCAGACAGGCCCGCCATGCAACCGAATCCTACGTCAAGACCATCGACAACCTCGTCAAAGGCGGGGTCGTCGTGAAAAGCGATCTATTGTCGGCCAGGGTTCATCTGGAAGACGTCAAGGTGCAGCAGACGCAGGCGGACAATGCCGTGCAGCAGGCGCTCGATCAGCTTCACCTGCTGCTGGGCATGCCGTTGTCGGAGCCGCTGGATGTGGCGGCGGATGTCGAAGTTCATCCCCTGGAGGGCAAACTGGCCGATTACCAGGCCGAGGCGCTCAAATCCAATCCCGGCCTCGCCGCGCTGCGCAACCAGCTGGATGCCGCGCAGGCCGCCATCAAGGTGGCGCGCGCGGGCAAATATCCGCAAGCCGGCTTGCTGGCACGCTTCGACACCAACGACAACAGCGTCGGATTCGATGCGCATTCCTATACGCTGGGCGGCCAGGTGTCGTGGCAGCTGTTTGACGGCGGGGTCGTCAGCGGCGCCATCCAGCGGGCCCAGGCCGGGCGCGACGAAATCGCGGCCAGGCTCAATCAGGCCGAAAACGGTATTGCTTACCAGGTGGCCGACGCCTGGCGGCGTGCCGACGAGGCCCAGCGGCGGGTCATGGCACGCGAACTGGCGGTCAGCCAGGCCGGGGAGGCCCAGCGCCTGGTGGACAAGCGCTATGCCAGCGGCGTCACGACCATCACCGAACTGCTCGGCGCCCAGGCGCAGCTGGACAAGGCCCGGGCCGATCTGGTGGCGGCCCGTTACGACCTCAAGGTGCAACGCGCCAACGCCCGCCTGGCCATCGGCCGTCTGCAACCCGATCAACTTTGA
PROTEIN sequence
Length: 466
MRLKKIKPAHLKTLVLLILLPTAGAATADTLDFTQAVQRALSQNPDILIAGTQIGQAEAAVRQSEGARLPKLAVSVNVTRTDDALNAFGLKLSQRSATFNDFGAGEFNPANPNVLNIAPRDLNHPDPVNNFNTRLEAQLPLYTGGMIEGYNEQARAYLRAARQGDTLARQKVIFDVLRAYEGVHTARAYADVARQARHATESYVKTIDNLVKGGVVVKSDLLSARVHLEDVKVQQTQADNAVQQALDQLHLLLGMPLSEPLDVAADVEVHPLEGKLADYQAEALKSNPGLAALRNQLDAAQAAIKVARAGKYPQAGLLARFDTNDNSVGFDAHSYTLGGQVSWQLFDGGVVSGAIQRAQAGRDEIAARLNQAENGIAYQVADAWRRADEAQRRVMARELAVSQAGEAQRLVDKRYASGVTTITELLGAQAQLDKARADLVAARYDLKVQRANARLAIGRLQPDQL*