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SCNpilot_expt_1000_bf_scaffold_2310_15

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 13022..13390

Top 3 Functional Annotations

Value Algorithm Source
RimK family alpha-L-glutamate ligase id=12492995 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 120.0
  • Bit_score: 232
  • Evalue 2.40e-58
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 118.0
  • Bit_score: 158
  • Evalue 1.40e-36
Conserved protein (Orf5) involved in biosynthesis of tetrahydromethanopterin {ECO:0000313|EMBL:CCE24107.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 118.0
  • Bit_score: 158
  • Evalue 6.30e-36

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Taxonomy

Methylomicrobium alcaliphilum → Methylomicrobium → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGACACGCCGCATCGTGATCTTCACCGACGATCCGGGCTGGCACGGCAGGCAGCTCAAACGTGCGTTCGCGCGCAGAGGCTATGCGGCCGACTACCTGTCGCTGACGGATTGCCGGGTGGATCTGAGCCAGGCCAGCGGCGTGGCGATACCCGGTTTCGGGCATGCGCTGCCCGACGGCGTGTTCGTCCGCGGCGTCCCGGGCGGCACTCTGGAACAGGTGACCCTCCGGCTTGATTTCCTGCACCTGTTGCCACTGCTGGGCGTGCCGGTCTACAACCCGGTCCGCGCCATCGAGAAAAGCGTGGACAAGGCCATGACCAGCCTGCTGCTGCATGGGCCGGCATTCCGACGCCCCCCACGTGGGTGA
PROTEIN sequence
Length: 123
MTRRIVIFTDDPGWHGRQLKRAFARRGYAADYLSLTDCRVDLSQASGVAIPGFGHALPDGVFVRGVPGGTLEQVTLRLDFLHLLPLLGVPVYNPVRAIEKSVDKAMTSLLLHGPAFRRPPRG*