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SCNpilot_expt_1000_bf_scaffold_2930_28

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(26404..26673)

Top 3 Functional Annotations

Value Algorithm Source
Addiction module antidote protein, HigA family n=1 Tax=Pseudomonas fluorescens Q2-87 RepID=J2YCS1_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 86.0
  • Bit_score: 149
  • Evalue 2.00e-33
Addiction module antidote protein, HigA family {ECO:0000313|EMBL:EJL05066.1}; TaxID=1038922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens Q2-87.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 86.0
  • Bit_score: 149
  • Evalue 2.80e-33
Cro/Ci family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 86.0
  • Bit_score: 148
  • Evalue 8.20e-34

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGACTATGCACAACCCCCCACACCCCGGTGAGTTCATCGCCGGCATCTACCTTGAGCCCAATGGGATCAGCGGCCGTGTGCTAGCCGAAAAGCTCGGCGTTGCAGCCTCTACGCTCAGTCGTGTTTTGAACGGCAGTGGTCGTATTTCGCCTGAGATGGCCTTGCGTCTTGCCAAGGCCATTGGCCGCTCTCCTGAAAGTTGGCTTGCCATGCAGGACGCACACGACCTTTGGATCGCACGGCAGTCTGTGGATTTGCACACGGCGTAG
PROTEIN sequence
Length: 90
MTMHNPPHPGEFIAGIYLEPNGISGRVLAEKLGVAASTLSRVLNGSGRISPEMALRLAKAIGRSPESWLAMQDAHDLWIARQSVDLHTA*