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SCNpilot_expt_1000_bf_scaffold_3075_6

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(5436..6578)

Top 3 Functional Annotations

Value Algorithm Source
efflux pump membrane protein; K03543 multidrug resistance protein A id=12495584 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 381.0
  • Bit_score: 730
  • Evalue 6.80e-208
  • rbh
efflux pump membrane protein; K03543 multidrug resistance protein A similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 380.0
  • Bit_score: 366
  • Evalue 1.10e-98
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 364.0
  • Bit_score: 630
  • Evalue 1.30e-177

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1143
ATGACCGTTCAGCCTCCCGAATCCAATCCGGCCAAGCGCAAACGTCTGCTGACGATCCTGGCCCTGATTTTTCTCCTTGTCGGAGTGGTTTGGGGGGTGCGCTGGTTTCTGCACAGCCGTGGCCACGAAACCACCGACGATGCTTACGTGGCCGGCAATCTCGTGCGGGTCACGCCGCGCATCGACGGTTCGGTGGTGGCGGTATTGGCCGACGACACCGATTTTGTCAAACAGGGCCAGATCGTGGTGAAGCTGGACGATACCGACGCCAGGTTGGCCCTCGCCAAGGCCGAAGCGGATCTCGGCGAAATCGTGCGCCGCATCAGCCAGACCTTCGAAGCCCATTCCCAGCAGCTTGCCAACCTGGCCGTGAAGCAGCGCACGCTGGAGCAGGCCGAGGCCGATCTGGCGCGACGCGAACGGGCGGTCGCCGTCGATGCCATCTCACGCGAGGAAGCCGAGCATGCCCATTCCGCGCGCGACAAGGCCCGATCCGAGCTCGCTCTGGCGCGTGCCCAGCTGGCCGCTTCCAGAGCCGAGGTGAGTGGGACATCGGTGGCGACGCATCCGGCCGTCAAGCAGGCCGAGGCCCGGCTGCGTGAAGCGTGGCTGGCGCTGAACCGCTGCGAGATCCGGGCGCCGGCCGAGGGCCAGGTGGCCAAGCGCTCGGTGCAGATCGGTCAGCAGGTCGCCCCCGGCGCGGCCCTCATGGCCATCGTACCCATGACGCATCTATGGGTCGAAGCCAATTTCAAGGAAGACCAGTTGAAGGGCATGCGCATCGGCCAGCCGGCACAACTGGTGTCCGATCTCTACGGCAGCGGCAGGACGTTCCATGGCACGGTGGTTGGACTATCGCCGGGCACCGGCAGCGTGTTTTCCCTGCTGCCGCCGCAGAATGCCAGCGGCAACTGGATCAAGATCGTCCAGCGCCTGCCGGTGCGGATCGCGCTCGACCCCGGGGAGCTGGCCGAGCACCCGCTGCGGGTCGGCCTGTCGATGACGGTCGAGGTCGAAACCCGCGCCGCCGGCAAGTCGGAGGCGGCGACCACGACCCGCTACGTGACGCCGGTGGAAGACGCGACCGGCGCGGATGCGCTGATCCGGTCGATCGTGCAGGCCAACCAGGTACGCAAGGACTGA
PROTEIN sequence
Length: 381
MTVQPPESNPAKRKRLLTILALIFLLVGVVWGVRWFLHSRGHETTDDAYVAGNLVRVTPRIDGSVVAVLADDTDFVKQGQIVVKLDDTDARLALAKAEADLGEIVRRISQTFEAHSQQLANLAVKQRTLEQAEADLARRERAVAVDAISREEAEHAHSARDKARSELALARAQLAASRAEVSGTSVATHPAVKQAEARLREAWLALNRCEIRAPAEGQVAKRSVQIGQQVAPGAALMAIVPMTHLWVEANFKEDQLKGMRIGQPAQLVSDLYGSGRTFHGTVVGLSPGTGSVFSLLPPQNASGNWIKIVQRLPVRIALDPGELAEHPLRVGLSMTVEVETRAAGKSEAATTTRYVTPVEDATGADALIRSIVQANQVRKD*