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SCNpilot_expt_1000_bf_scaffold_3554_4

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 1775..2482

Top 3 Functional Annotations

Value Algorithm Source
Putative type 4 fimbrial biogenesis transmembrane protein, pilW n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LS00_RALME similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 236.0
  • Bit_score: 223
  • Evalue 2.20e-55
putative type 4 fimbrial biogenesis transmembrane protein, pilW; K02672 type IV pilus assembly protein PilW similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 236.0
  • Bit_score: 223
  • Evalue 6.80e-56
Putative type 4 fimbrial biogenesis transmembrane protein, pilW {ECO:0000313|EMBL:ABF07076.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 236.0
  • Bit_score: 223
  • Evalue 3.10e-55

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Taxonomy

Cupriavidus metallidurans → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGATGAATATCAAGCGCCAGCGCGGCATCGGGTTGGTGGAAATCATGGTCTCCATGATGATCGCACTGTTCCTGTTGCTCGGGATCGGGACGATTTTCATGACCACCCGCTCCACCTACGGGGATCAGCAGGGGCTATCCAATCTGCAGGACAACGAGCGTCTGGCCATGTTCATGCTCACCAACGTGATTCAGATCGGCGGCTACTTCCCCGACCCGACCACGAGCACAGCCGCTCTGTCACTTCCTGTCGCGGCGCCCTATGTCGTGGCCGGCCAGGCGGTGAGCGGCACCGAGGGGGGTGCTGCGCCCGATAAGGTCAGGGTGCGCTTCATGACGGCATCGGGCGATGGCATCGCGAACTGCAATGGCGGCGCCAACACGTCTGGCACCAATGTCGTCTACTCTAACGAGTTCGATATTAGCGGCAATACCCTGCGTTGTGCGGTCAACGGTAACAACCCGCAGCCGCTGGTCACAGGCGTGACAGACATGCAGGTGCTTTATGGCGCCGACACCACGAGTTCGGGATCAATCACGCAGTATCTGACGAAGACGCAGATCGATACGAACGTCAACGGAAGCAGTTGGAACAATGTGCGATCGGTCCGCATCACCCTGTCCTTCGTCAATCCACTCGCCGCGCAGGCAGGCCAGCCCGCCACCCTGCCTTTCACCAAAATCATACCGGTGATGAACAAGCTATGA
PROTEIN sequence
Length: 236
MMNIKRQRGIGLVEIMVSMMIALFLLLGIGTIFMTTRSTYGDQQGLSNLQDNERLAMFMLTNVIQIGGYFPDPTTSTAALSLPVAAPYVVAGQAVSGTEGGAAPDKVRVRFMTASGDGIANCNGGANTSGTNVVYSNEFDISGNTLRCAVNGNNPQPLVTGVTDMQVLYGADTTSSGSITQYLTKTQIDTNVNGSSWNNVRSVRITLSFVNPLAAQAGQPATLPFTKIIPVMNKL*