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SCNpilot_expt_1000_bf_scaffold_3554_5

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 2479..3078

Top 3 Functional Annotations

Value Algorithm Source
Putative type-4 fimbrial biogenesis transmembrane protein n=1 Tax=mine drainage metagenome RepID=E6PLK6_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 202.0
  • Bit_score: 179
  • Evalue 4.00e-42
Putative type-4 fimbrial biogenesis transmembrane protein {ECO:0000313|EMBL:CBH95807.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 202.0
  • Bit_score: 179
  • Evalue 5.60e-42
type-4 fimbrial biogenesis transmembrane protein; K02673 type IV pilus assembly protein PilX similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 166.0
  • Bit_score: 166
  • Evalue 8.40e-39

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 600
ATGAACAGGCCGGCCTTGAACCTTTTCCGAACTGGTGTTGCAGGGCAGTGCTGTCCGCCTGTGAGTGGTCGCAGACAGACCGGCTATGTACTGGTCGTCAGCATGGTCCTGCTGGTGGTACTGACGATCCTCGCGGTCAGCATGTTCCGCAGCTTCGGCCTGCAGCAGCTCATGGCCGGCAACCTGCGAGAAAAGACGCGCGCCGTGGACGCCGCGCAAACCGCGATCAACTACGCGGAGTGGTGGCTGGCCCAGGGCACCAATGCCACGACCGGCGTGGCCTGCGCGAGTGTGGTCAATGCCCCGGTGGTAGTGGTATGCAACACGGCGATCGCCAATCCGACCGCCAATGGCAACTGGGCGGTCGGCGTCAACTTCAACCCCAACCCGGCGTATATGACGGTCAATGCAAGCGGTGGCGCGGGAACCTATTTCCAGGCGCCGCAGTTCCACATCCAGTACGTAGGCCTGGCTGCCGGCGGTACGGGCGCGCTGTACCGCATCACCGCCAAGGGTTGGGGCGGCAATTCCGCAGCTGTCGCCGTCCTGCAAAGCACCTACATCATCAGTACCGGCGTCAAGTCCCTCACAGGACCCTAA
PROTEIN sequence
Length: 200
MNRPALNLFRTGVAGQCCPPVSGRRQTGYVLVVSMVLLVVLTILAVSMFRSFGLQQLMAGNLREKTRAVDAAQTAINYAEWWLAQGTNATTGVACASVVNAPVVVVCNTAIANPTANGNWAVGVNFNPNPAYMTVNASGGAGTYFQAPQFHIQYVGLAAGGTGALYRITAKGWGGNSAAVAVLQSTYIISTGVKSLTGP*