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SCNpilot_expt_1000_bf_scaffold_13772_3

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 3011..4579

Top 3 Functional Annotations

Value Algorithm Source
transketolase (EC:2.2.1.1) similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 522.0
  • Bit_score: 862
  • Evalue 6.40e-248
  • rbh
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 522.0
  • Bit_score: 862
  • Evalue 2.90e-247
transketolase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037043E6 similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 522.0
  • Bit_score: 868
  • Evalue 3.70e-249
  • rbh

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1569
ATGGAAGGCGTCGCCTCCGAGGCCGCCTCGCTGGCCGGCCATCTCAAGCTGGGCAAGCTGATCTGTCTGTACGACGATAACCACGTCACCCTGGCGGGCGGAATCGACCTCACTTTTTCCGAAGTGCGCGCCAAGCGCTTCACAGCCTATGGCTGGCAGACCATCACCGTGACCGACGGCAACGACGTGGCCACCCTCAACGCCGCGCTGGATGCCGCCCGCGCCGAGACGTCCCGCCCGACCCTGATTCTGGTGCGCTCGCATATCGGCTTCGGTTCACCCGAGCAGGACAGCTACAAAGCGCACGGCTCGCCGCTTGGCGCCGAGGATGTGAAAAAAACCAGGGAAAAGCTTGGCTGGCCGCTCGACCCGCCGTTTCTCGTTCCGGAACCGGCGCTGGCGCATTTCCGCGAGGCACTGGATCGCGGCGCCAGGGCGGAAGCCGAATGGAATGTGCGGATGGAAAACCATGCCAGGGCATTTCCCGAACTGGCCAGGGAACTGCAAGACCGCCTGAACGGCGAGCTTCCGGCGGCCTGGGACGCCGATATTCCGGTCTTTCCTGGCGATGAAAAGGGCATGGCCACCCGCGTTGCCAGCGGCAGGATCATGAATGCGTTCGCCACGAAACTGCCGGCACTGTTTGGCGGCTCGGCCGATCTGGATCCCTCCACCCATACCGCCTTGAAAGGGCTCGGCGACTTCAATCCGGCCATGCCCGTCGGCGAGAACATCGAAGGATCCGACAGCGGCGGCTGGAGCCATGCCGGCCGCAACCTGCATTTCGGCGTGCGCGAACATGCGATGGGCGCCATCGTCAATGGCCTCGCGGCGCACGGGGGATTCATTCCGTACGGCGCCACGTTCCTGATCTTCTCGGACTACATGCGCCCGGCGATTCGTCTGGCGGCGTTAATGGGTGTGCACGCGGTGCACGTTTTCACCCACGACAGCATCGCGCTCGGCGAAGACGGACCGACCCATCAACCGGTGGAGCAACTGGCCAGCTTGCGCGCCATTCCCCATCTCACCGTCATCCGCCCTGCCGACGCCAACGAAACCGCGGTGGCGTGGAAAGTGGCGGTGGAAACCCGCGATCGGCCGGTGTTGCTGGCGCTGACCCGGCAGGCGGTTCCCACCCTCGACCGCCAGCGCTATGCCGACGCCGACGGCCTGCGTCGCGGCGCCTATGTGTTGAGCGATGCGGAAGATCACAAGCCGGCGTTGATCCTGATGGCCAGCGGTTCCGAAGTCGCGCTGATCCTGGCCGCCGCCGAGCGCCTGCAAAGCGAAGGCGTCAGTGTGCGCTGCGTATCGATGCCGAGCTGGGAATTGTTCGATGCCCAGCCGCAGGCTTATCGCGACCAGGTTTTGCCGCCCGACGTGCCGGCGCGGCTGGCAGTCGAACTGGGGGTGTCCCAGGGCTGGTGCCGCTATGTCGGCGCCGGGGGCGACATGCTGGGCATCGAACATTTCGGCGCGTCGGCCCCGGCCGAGATACTGCTGCGCGAATACGGTTTCACGGTAGAGAACGTGGTGGCGCGGGCCCGGGCGCTGTTGACACGATGA
PROTEIN sequence
Length: 523
MEGVASEAASLAGHLKLGKLICLYDDNHVTLAGGIDLTFSEVRAKRFTAYGWQTITVTDGNDVATLNAALDAARAETSRPTLILVRSHIGFGSPEQDSYKAHGSPLGAEDVKKTREKLGWPLDPPFLVPEPALAHFREALDRGARAEAEWNVRMENHARAFPELARELQDRLNGELPAAWDADIPVFPGDEKGMATRVASGRIMNAFATKLPALFGGSADLDPSTHTALKGLGDFNPAMPVGENIEGSDSGGWSHAGRNLHFGVREHAMGAIVNGLAAHGGFIPYGATFLIFSDYMRPAIRLAALMGVHAVHVFTHDSIALGEDGPTHQPVEQLASLRAIPHLTVIRPADANETAVAWKVAVETRDRPVLLALTRQAVPTLDRQRYADADGLRRGAYVLSDAEDHKPALILMASGSEVALILAAAERLQSEGVSVRCVSMPSWELFDAQPQAYRDQVLPPDVPARLAVELGVSQGWCRYVGAGGDMLGIEHFGASAPAEILLREYGFTVENVVARARALLTR*