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SCNpilot_expt_1000_bf_scaffold_1665_17

Organism: SCNPILOT_EXPT_750_P_Legionella_40_6_1

near complete RP 51 / 55 BSCG 48 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(17299..18987)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Legionella shakespearei RepID=UPI0003827DAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 562.0
  • Bit_score: 1009
  • Evalue 1.10e-291
  • rbh
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 563.0
  • Bit_score: 1004
  • Evalue 1.50e-290
  • rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111, ECO:0000313|EMBL:CBJ12175.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 563.0
  • Bit_score: 1004
  • Evalue 6.60e-290

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Taxonomy

Legionella longbeachae → Legionella → Legionellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1689
ATGTCTGAAAGTTTCAAAGAGTTATTTGAGCAAAGTATTGCCGGCGCGCAATTTTATCCTGGTGCCATCATCACCGCAAAAGTAATCGGTATCGAAGATGACTTTATCATTTTAAATGCTGGTCTAAAATCCGAAGGGATTGTTGCTGTTGAAGAATTTTATGATAAAGATGGTGCTCTGGAAGTCAGCCTGGGTGATACTGTCGAAGTAGCATTGGATTCAGTAGAAGATGGCTACGGCGAAACGCTCCTTTCAAGAGAAAAAGCAAAACGTCAGGAAGCTTGGCGTAAATTATCCAAATCACATGAAAACAACGAAACCGTTACGGGTCTTATTTCCGGTAAGGTTAAAGGTGGTTTCACTGTGGAAATCGGTAGCGTCCGCGCATTCTTACCGGGTTCATTAGTAGATGTAAGACCGGTCCGAGATCCTTCTTACCTCGAAGGAAAAGAGCTTGAGTTCAAAGTAATCAAAATGGACTTAAAGCGCAACAATATTGTTGTATCACGTCGTGCAGTAGTTGAAGAGGAAAGCAGTGCTGATCGTCAAGCACTTCTTGAGTCTTTACATGATGGCCAAGAATTACATGGTATCGTTAAGAACCTCACTGATTATGGNNNNNNNNNNNNNNNNNNNNNNNNTCTGGGCGGTATTGATGGTTTATTACACATCACGGATATTTCCTGGAAACGAGTCAAACATCCAAGCGAGCTTCTGTCTGTAGGACAGGATGTTAAAGTTAAAGTACTAAGCTTTGACAGCGAAAGAAATCGTGTTTCCTTAGGTATGAAACAATTAGGTAATGATCCATGGGTTGACCTGGTTGAGCGCTATCCATTACACAAAAAATTAAAAGGTAAAGTGACTAACATTACTGATTACGGTTGTTTTGTGGAAATTGAAGAAGGTGTTGAAGGTTTGGTGCATATGTCCGAGATGGATTGGACCAACAAGAACGTACATCCAAGCAAAGTAGTTTCTATGGGGGATGTTGTTGATGTAATGGTTCTTGAAATTGATGAAGACCGTCGTCGAATCTCTTTAGGTATGAAGCAATGCGTGGGTAATCCATGGCAACAATTTGCAGCAAGCCATTCTAAAGGGCAAAAAGTTAGCGGTAAAATCCGTTCAATTACTGACTTTGGTGTTTTCATCGGTCTAGAAGGTGAAATCGATGGTTTGGTTCATCTGTCTGATATTTCCTGGAATACTCCTGGTGAAGAAGCAGTGAAGCAATACAAAAAGGGTCAGGAATTAGAAGCGGTTATTTTAGCTATTGATCCTGAGCGTGAGCGTATTTCTTTAGGTTTAAAACAACTTGAAGGTGATAACTTCACAAGCTTTGTTGATGAATATACTAAAGGCGCTATCGTTAAAGGTACTGTTACTGCAGTTGAGCCTAAAATGGTAACTGTAGCATTATCTGATGATATCACCGGTACTGTTCGTGTTAGCGAATTATCAAATGAGCGTATTGATGACGCAACACAACACATCAATGTAGGCGATGAGCTTGAAGCGAAAATCATGAACGTTGATCGCAAAAACCGCAGTATTAGTTTATCTGTGAAAGCGAAAGATGCTCAAGAGGAAGCGGATGCTATCAAGAAATACTCCCGCACAGAAGCTTCCACAACCACTTTAGGCGATTTGCTTAAAGAAAAAATGGCAAGCAAAGAAGGAGAATAA
PROTEIN sequence
Length: 563
MSESFKELFEQSIAGAQFYPGAIITAKVIGIEDDFIILNAGLKSEGIVAVEEFYDKDGALEVSLGDTVEVALDSVEDGYGETLLSREKAKRQEAWRKLSKSHENNETVTGLISGKVKGGFTVEIGSVRAFLPGSLVDVRPVRDPSYLEGKELEFKVIKMDLKRNNIVVSRRAVVEEESSADRQALLESLHDGQELHGIVKNLTDYXXXXXXXXXLGGIDGLLHITDISWKRVKHPSELLSVGQDVKVKVLSFDSERNRVSLGMKQLGNDPWVDLVERYPLHKKLKGKVTNITDYGCFVEIEEGVEGLVHMSEMDWTNKNVHPSKVVSMGDVVDVMVLEIDEDRRRISLGMKQCVGNPWQQFAASHSKGQKVSGKIRSITDFGVFIGLEGEIDGLVHLSDISWNTPGEEAVKQYKKGQELEAVILAIDPERERISLGLKQLEGDNFTSFVDEYTKGAIVKGTVTAVEPKMVTVALSDDITGTVRVSELSNERIDDATQHINVGDELEAKIMNVDRKNRSISLSVKAKDAQEEADAIKKYSRTEASTTTLGDLLKEKMASKEGE*