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SCNpilot_expt_1000_bf_scaffold_4185_12

Organism: SCNPILOT_EXPT_750_P_Legionella_40_6_1

near complete RP 51 / 55 BSCG 48 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(9995..10198)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella dranc similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 67.0
  • Bit_score: 127
  • Evalue 6.60e-27
rpoZ; RNA polymerase omega subunit; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 67.0
  • Bit_score: 125
  • Evalue 5.60e-27
DNA-directed RNA polymerase subunit omega n=1 Tax=Legionella shakespearei RepID=UPI000380B1DE similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 67.0
  • Bit_score: 127
  • Evalue 4.70e-27

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Taxonomy

Legionella drancourtii → Legionella → Legionellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCACGAGTTACTGTTGAAGATTGTCTAGAACATGTTGAGAATCGTTTTGAATTAGTTATGGTTGCGACCAAGCGGGCACGTCAGATTGCTGTACGAGGTGATCAGCCTATGGTTGAGTGGGAAAATGATAAGCCTACAGTAGTTGCTTTGCGAGAAATTGCTGAAGGATTGGTTAAAGCCGATATTATGGACAAAGAATAA
PROTEIN sequence
Length: 68
MARVTVEDCLEHVENRFELVMVATKRARQIAVRGDQPMVEWENDKPTVVALREIAEGLVKADIMDKE*