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SCNpilot_expt_1000_bf_scaffold_1172_27

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 23636..24394

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UE94_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 245.0
  • Bit_score: 285
  • Evalue 5.00e-74
ABC transporter, permease protein {ECO:0000313|EMBL:AII86207.1}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Planktomarina temperata RCA23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 245.0
  • Bit_score: 290
  • Evalue 2.80e-75
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 245.0
  • Bit_score: 285
  • Evalue 1.60e-74

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Taxonomy

Planktomarina temperata → Planktomarina → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGCTGAAGGGCGCGAGTGGCATCGCGGCGATACTGCTGCTGTGGCAGCTTTCAGTCTATGTCGTCGACGTGCCACCGCATTTCTATCCCAGCCCGGCGGCGGTCTGGCGGGCCTTCATCGAGATGACGGAGAAGGGCATCCTTCCGTCCTATATAGCTGACAGCATGCTGCGCTACCTGCTCGGCGTCCTGATCGGCACCGCGATCGGCTGCGCTCTGGCGCTTCTTATCGCCAGTTCCAAGCTCGCCATGCGGATGCTCGGACCGATGATCGACTTCCTCTACTATATGGTCGAACTCGCCTGGATTCCCCTGTTCGTCATCTGGTTCGGCTTCGGGCTGCCGACCATTCTCGTCGCCGTGGTCTACGTCGTGATCTGGCCAGTGCTTTTCAATTCGCTGTCCGGCATCCGTAGCATCCAGCCCTCGCTGATCCTGGCCGCGCGGTCGCTCGGCGGGTCGCGATGGCAGGTGCTGCGCGAGGTCGTTCTGCCCGGGATGCTGCCGCAGGCGGTCAACGGCTTCAGGGTCGCGGCCGGGTTCGCCTTCCGCGCGCTCATCTTTGGCGAGCTGATCGGAGCCCAGTCCGGCATCGGCTACCTCATCTTCGAGAGCACGACGCACCTGCAGACGGACCGGACGGTGCTCGGCATGATCTGCATGGGCCTCTTGTGGCTCTTCATCGACCGCAACTATCTGCGTCCGTTCGAGAAGGCGACGATCGACCGCTGGGGAATGGTGGTCAGCCATGACAGCTAA
PROTEIN sequence
Length: 253
MLKGASGIAAILLLWQLSVYVVDVPPHFYPSPAAVWRAFIEMTEKGILPSYIADSMLRYLLGVLIGTAIGCALALLIASSKLAMRMLGPMIDFLYYMVELAWIPLFVIWFGFGLPTILVAVVYVVIWPVLFNSLSGIRSIQPSLILAARSLGGSRWQVLREVVLPGMLPQAVNGFRVAAGFAFRALIFGELIGAQSGIGYLIFESTTHLQTDRTVLGMICMGLLWLFIDRNYLRPFEKATIDRWGMVVSHDS*