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SCNpilot_expt_1000_bf_scaffold_1307_19

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(18322..18774)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ97_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 153.0
  • Bit_score: 188
  • Evalue 3.80e-45
HTH-type transcriptional repressor NicR {ECO:0000313|EMBL:CDX27049.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 153.0
  • Bit_score: 188
  • Evalue 5.30e-45
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 153.0
  • Bit_score: 181
  • Evalue 1.50e-43

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Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGAACGCGCGCGATAGCGCACTTCGGCTGGTTGCGGGCGAAGCGGACGGCTACCGCCTCGACGAGCAGGTCGGCTACCTGCTGCGCAAGGCCAACCAGCGCCATCTGGCGATCTTTGCGAAGGCGATCCCCGACCTGACGCCGCCGCAATTCGCCGCGCTCGCCCGGCTGGCCGAGATCGGGCAGGCCTCGCAGAACCAGCTCGGCCAGTCGATCGCCATGGACGCCGCCACCATCAAGGGCGTCATCGACCGGCTGAAGGCGCGCGGCCTCGTGGAGCTGTCGAACCACGGCTCCGACCGCCGCCGCCGCGTCGTCAGCCTCACGGCGGCCGGCCGGGCCACCGTCGAGGCGCTGCTCCCGCTCGGCGGCGCCGTCAGCGACGAGACGCTGGCGCCGCTCAACCCGCGCGAGGCCGCGACCCTGCTGAAGCTGCTGGCGCGGCTGACCTGA
PROTEIN sequence
Length: 151
MNARDSALRLVAGEADGYRLDEQVGYLLRKANQRHLAIFAKAIPDLTPPQFAALARLAEIGQASQNQLGQSIAMDAATIKGVIDRLKARGLVELSNHGSDRRRRVVSLTAAGRATVEALLPLGGAVSDETLAPLNPREAATLLKLLARLT*