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SCNpilot_expt_1000_bf_scaffold_1711_3

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 1540..1824

Top 3 Functional Annotations

Value Algorithm Source
cation:proton antiporter n=1 Tax=Hoeflea sp. 108 RepID=UPI0003795813 similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 92.0
  • Bit_score: 149
  • Evalue 1.60e-33
multiple resistance and pH regulation protein F; K05563 multicomponent K+:H+ antiporter subunit F similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 89.0
  • Bit_score: 132
  • Evalue 6.40e-29
Multiple resistance and pH regulation protein F {ECO:0000313|EMBL:ADU44297.1}; Flags: Precursor;; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 89.0
  • Bit_score: 132
  • Evalue 2.90e-28

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGACCGCCGCCGACGTCCTGCTGTGGTCCGTGACGATCGCCCAGACGATGCTCGTGGTGGCTATGGGCTGCTACACCTACCGCCTCATCCGCGGCCCGCGCGCGCAGGACCGGGTGCTCTGCCTCGACGCGATCTATGTCTGCGCCATGCTGCTGGTGCTGACCGTCGGCATCCGCACCGGAAGCCAGATCTATTTCGAGGCGGCCCTGATCATCGCCGTGCTGGGCTTCGTCTCCAGCGTCGCGCTGGCGAAGTTCCTGATGCGCGGGGAGGTCATCGAATGA
PROTEIN sequence
Length: 95
MTAADVLLWSVTIAQTMLVVAMGCYTYRLIRGPRAQDRVLCLDAIYVCAMLLVLTVGIRTGSQIYFEAALIIAVLGFVSSVALAKFLMRGEVIE*