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SCNpilot_expt_1000_bf_scaffold_1711_10

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(7459..8061)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix transcriptional regulator with cupin domain n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A4K4_PELCD similarity UNIREF
DB: UNIREF100
  • Identity: 36.0
  • Coverage: 178.0
  • Bit_score: 108
  • Evalue 6.60e-21
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 178.0
  • Bit_score: 108
  • Evalue 2.10e-21
Helix-turn-helix transcriptional regulator with cupin domain {ECO:0000313|EMBL:ABA88703.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.0
  • Coverage: 178.0
  • Bit_score: 108
  • Evalue 9.30e-21

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Taxonomy

Pelobacter carbinolicus → Pelobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
GTGCCGCGCAAGGGCAGAACCGGCACGGCGCGCCAGATCGAGGCGAGCGGCGTCCTCGGCGGTCGGCTGCGCGACCTGCGGCTAGTGCGCGGCCTGACGATCGCCGGGCTCGCCGCCCGCTCGCAGGTGCCGGCCAGCACGATCAGCAAGATCGAGAACGGCCTGCTCAATCCGAGCCTGGTCAACGCGATCAACCTCGCGACGGCGCTGGAGGCCAATCTCGGCTTCCTCGTCGACCAGGCGCGCACGCGCTCGGCCCGCTACGCGATCGTGAGGCGCCACCAGCGCGGCCGCAACGACTTCCCCGAGATGGCGCTCGTGCTGGAGGACCTGAACAGCGGCTTCGTGCCGGGCGTGCTGGAAAGCCGCATCGGCACGATCAGCCCCGGCGCGCATTCGGGCCTCGAGGCGATGACGCATGCGGGCGAGGAAGTCGCCCATGTGCTCGCCGGCGCGCTGACCTACGACATCGACGGCGAGTCGATCCTGCTCGGTACCGGCGACACGCTGCACTTCAAATCGGACGTGCCGCACCGGTGGATGAACGACAGCGACGGGCCAGTCCAGGTCCTGTGGATATTCTCGGACGGCCTGTCATTCTAA
PROTEIN sequence
Length: 201
VPRKGRTGTARQIEASGVLGGRLRDLRLVRGLTIAGLAARSQVPASTISKIENGLLNPSLVNAINLATALEANLGFLVDQARTRSARYAIVRRHQRGRNDFPEMALVLEDLNSGFVPGVLESRIGTISPGAHSGLEAMTHAGEEVAHVLAGALTYDIDGESILLGTGDTLHFKSDVPHRWMNDSDGPVQVLWIFSDGLSF*