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SCNpilot_expt_1000_bf_scaffold_1711_22

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(20498..21442)

Top 3 Functional Annotations

Value Algorithm Source
ABC transport system substrate-binding protein n=3 Tax=Amycolatopsis mediterranei RepID=D8HLC7_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 290.0
  • Bit_score: 191
  • Evalue 1.60e-45
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 290.0
  • Bit_score: 191
  • Evalue 5.00e-46
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AEK47911.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 290.0
  • Bit_score: 191
  • Evalue 2.20e-45

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 945
GTGTCAGTGTGTTTCAGATCGTCGATTTTCGCCGGTGCGGCAGCCGCCGTCGGGCTCTGGGCATTGTCGCTCGGCGGCGCCCAGGCTTCGGACGTCGTGATGCCGGCCAAGGATGATGCCGTCAACGCGCAGCTGCCCCAGGAGGTCAAGGACCGCGGCCAGATCCGCATCGTTTCCACCTTCGGCTATGCCCCGCAGCAGTTCTTCGCCGAGGACGGCAAGACGCCGGACGGCCTGTCTGTCGATCTCGGCAAGGCGCTCGGCGCGGTCGCCGGCGTCCCGGTCGAGTTCACCAACGCCACGTTCGACTCGCTCATTCCGGGCCTCGACGCCGGGCGCTTCGACATGGTCATCGCGGCCATGAGCGCGACCGCCGAGCGGGGCGCCAAGGTCAATTTCGTCATCTACCAGAAGACGGACGCGCGGCTGCTCGTGCGCGCCGGCAACCCGAAGGGGATCAATGGCCTGCAGGATCTGTGCGGCCTCAAGGTCGCGTCGCTGAAGGGCTCGCTCTACAACCAGGTCATCGACGCGGTCTCGGCCAAGTGCAAGGAAGCCGGCAAGGAGCCGGTCGACCTCAGCACCTACGACAATTCCGACTCCGTCTACCAGGCGCTGATCGCCGGGCGCGTCGACGCCAACTATCGCGACTCCGCCCCGCTGATCTACACGGCGCGCGCCTCCGAGGGGCGGCTCGAAGTGGTCGGCCCCGAATATCCGGACACGCCCTACGGCATCGCGATCGCCGGCAAGAACGCCGACTTTGCCAAGGCGATGACCGCCGCTCTCGACGTGCTCATCAAGAACGGCACCTACCAGGCCATCCTGGACAAGTGGGGCCTCGGCTCGCGCGCCGTCGGCGCAGCCACCCTCACGGCGGTCGGCTCCCCGGCGGACTCCTATCCGCGTCCCCCGTCAGCGGTCGAGATTGCCTTCGGCAAGTAG
PROTEIN sequence
Length: 315
VSVCFRSSIFAGAAAAVGLWALSLGGAQASDVVMPAKDDAVNAQLPQEVKDRGQIRIVSTFGYAPQQFFAEDGKTPDGLSVDLGKALGAVAGVPVEFTNATFDSLIPGLDAGRFDMVIAAMSATAERGAKVNFVIYQKTDARLLVRAGNPKGINGLQDLCGLKVASLKGSLYNQVIDAVSAKCKEAGKEPVDLSTYDNSDSVYQALIAGRVDANYRDSAPLIYTARASEGRLEVVGPEYPDTPYGIAIAGKNADFAKAMTAALDVLIKNGTYQAILDKWGLGSRAVGAATLTAVGSPADSYPRPPSAVEIAFGK*