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SCNpilot_expt_1000_bf_scaffold_1907_8

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 6070..6804

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=2 Tax=Rhizobium RepID=J2L292_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 242.0
  • Bit_score: 334
  • Evalue 9.10e-89
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJJ27592.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 242.0
  • Bit_score: 334
  • Evalue 1.30e-88
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 242.0
  • Bit_score: 321
  • Evalue 3.30e-85
  • rbh

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGACCGCCAAATCGGCCAAGACACACGCGATGCGGGCCGTCATCGAGCTGCGCAAGCGCATCCTCGGCGGCGAGCTGCCGGGCGGCATGCGGCTGTTCGAGGTGCCGATGGCCGAGCAGCTCCAGATCTCGCGCACGCCGGTGCGCGAGGCGATGTCGCGGCTGGCCGAGGAGGGGCTGCTGGAGCGGGCGCGCAACGGCGGCTTCATCGTCCGCACCTTCAGCTTCGCCGACGTGGTCGACGCCATCGAGCTGCGCGGCGTTCTGGAGGGCACCGCGGCGCGGCTGGCGGCCGAGCGCGGCGTCTCCCCCGAGGCATTGGCGGGAATCTCGGCCGTCGTCGCCAAACTGGACGAATGCTTCGGAAACGGGCCGGAGCAGGTCGATTTCGACCGCTACGCCGAGCTCAACGCCGAATTTCACCATCTTCTGGCCGGCCTTTCGGGCAGCGACATCGTCCGCCGCGAGGTCGAGCGCGCCACCCGGCTGCCCTTCGCCTCGCCTTCGGCCTTCCTGCCGGACCGCAGCGACATCGCCGCCTTCCGGCGCTCGCTCGGCTCCGCGCAGGAGCAGCACCGCGCGATCGTCGCCGCGATCGCCGCCCGCGAGGGCACCCGCGCCGAGATGATCGCGCGCGAGCATGCGCGTACCGCCCGGCACAATCTCGACTACGTGCTGAGCGAAGACCGCAGCCTGATCAGCCGCGTGCCGGGGCTGGCCCTCGTCATCGGCTGA
PROTEIN sequence
Length: 245
MTAKSAKTHAMRAVIELRKRILGGELPGGMRLFEVPMAEQLQISRTPVREAMSRLAEEGLLERARNGGFIVRTFSFADVVDAIELRGVLEGTAARLAAERGVSPEALAGISAVVAKLDECFGNGPEQVDFDRYAELNAEFHHLLAGLSGSDIVRREVERATRLPFASPSAFLPDRSDIAAFRRSLGSAQEQHRAIVAAIAAREGTRAEMIAREHARTARHNLDYVLSEDRSLISRVPGLALVIG*