ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2435_26

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(20419..21207)

Top 3 Functional Annotations

Value Algorithm Source
ROK family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDP1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 259.0
  • Bit_score: 352
  • Evalue 2.60e-94
ROK family transcriptional regulator {ECO:0000313|EMBL:ESX68745.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 259.0
  • Bit_score: 352
  • Evalue 3.70e-94
ROK family protein similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 247.0
  • Bit_score: 346
  • Evalue 1.00e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
GTGCAGGGCATCACCGATTCCTCCGATTCCCGCCTGCTCTGGTCGCCGATCACGCCCCACAGCGACATCGCCTTCGGCCCGCTGCTGGAGGAGCGGCTGGGCATACCGACGACGGTGCAGAACGACTGCAACATGATCGCGGTGGCGCTGAAATGGCGCTGGCCGCAGCGCTACGGCGCGGATTTCTTCGCCGTGCTTCTGTCCAACGGCATCGGCATGGGGCTGATGCAGAAGGGCCAGCTCTTCACCGGCACCCATTCGTCGGGCGGCGAGTTCGGCCACATGATCCACGTGCCGCACGGCGCGCTCTGCCGCTGCGGCCGCCGCGGCTGCATCGAGGCCTATGCCGGCAACTATGCGCTGGTGCGGAGCGCGGCCGGCGGCGCCGAGACCGACCCGCCCGCCGCCGACATCGGCCAGGCCGAGATCGAGGCGCTGGCCGACGCCGCGCGGGCCTCGGAGGGGCGCGAGCGCGCCGCCTTCCGCCGCGCCGGCGAGGCGATCGGCTACGGCATGGGCAACCTGTTCGCGCTGTTCGATCCCGCCCCGGTCGCCATCGTCGGTCCCGGCGCGCTCGCCTTCGACATACTGGAGGAGCCGATCCGCGCCGCGATCGCCCAGACGGCGGGCGGCCAGCACAGCGGCGCCATCTCCTTCGCCACCGAGCCGAACGAGATGCCGCTGATCCGCGAGGGCTGCGCCATGACCGCGCTCGCCTTCGTCGACGACCAGGTCGCCGCCCGCGCCTCCGCCCCCGCCGCCCACCAGCCCGGTCGGGCGATGGCCTGA
PROTEIN sequence
Length: 263
VQGITDSSDSRLLWSPITPHSDIAFGPLLEERLGIPTTVQNDCNMIAVALKWRWPQRYGADFFAVLLSNGIGMGLMQKGQLFTGTHSSGGEFGHMIHVPHGALCRCGRRGCIEAYAGNYALVRSAAGGAETDPPAADIGQAEIEALADAARASEGRERAAFRRAGEAIGYGMGNLFALFDPAPVAIVGPGALAFDILEEPIRAAIAQTAGGQHSGAISFATEPNEMPLIREGCAMTALAFVDDQVAARASAPAAHQPGRAMA*