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SCNpilot_expt_1000_bf_scaffold_2435_28

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 21924..22883

Top 3 Functional Annotations

Value Algorithm Source
xylose ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D8B5D similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 319.0
  • Bit_score: 563
  • Evalue 1.60e-157
D-xylose ABC transporter periplasmic substrate-binding protein {ECO:0000313|EMBL:EHK58135.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 320.0
  • Bit_score: 542
  • Evalue 5.30e-151
D-xylose ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 319.0
  • Bit_score: 528
  • Evalue 1.80e-147

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
GTGATCGGCGTGTCCTGGTCGAACTTCCAGGAAGAGCGCTGGAAGACCGACGAGGCGGCCATGAAGGCGGCGATCGAGGCGGCCGGCGACAAGTACATCTCGGCCGACGCGCAGTCGAACCCCGGCAAGCAGCTCACCGACGTGGAGAGCCTGATCGGCCAGGGCGCCAACGCGCTGATCATCCTCGCGCAGGACGCCTCGGCCATCGGCCCGGCGGTGGAGAAGGCCGTCGCGGAAGGCATCCCGGTCGTCGGCTACGACCGCCTGATCGAGAACAAGGACGCCTTCTACCTCACCTTCGACAATGTCGAGGTGGGCCGCATGCAGGCGCGCGGCGTGTTCGCGGTGAAGCCGGAAGGCAACTACGTCTTCATCAAGGGCAACGGCGCCGACCCGAACGCCAACTTCCTGTTCCAGGGACAGATGGAAGTGCTGAAGGGCGCGGTCGACGCCGGCAAGATCAAGAATGTCGGCGAGGCCTATACCGACGGCTGGCTGCCGGCCAACGCGCAGCGCAACATGGAGCAGTTCCTGACCGCCAACAACAACAAGGTCGACGCGGTCGTCGCCTCCAACGACGGCACGGCGGGCGGCGCGATCGCGGCGCTCGCGGCGCAGGGCCTCGCCGGCTCGGTGCCGGTGTCGGGCCAGGACGGCGACCACGCCGCGCTCAACCGCATCGCGCTCGGCACGCAGACCGTGTCGGTGTGGAAGGATGCGCGCGCGCTCGGCAAGGCGGCGGCCGAGATCGCCTCGGCGCTGGCCGGCGGCACGGCGATGGACAAGATCCCCAACGCGACCAAGTTCAAGACGCCGGGCGGCCTCGAGATGAACACGGTGCTGCTGGCGCCGGTGCCGATCACCAAGGACAACCTCAACGTCGTCATCGACGCCGGCTGGGTGTCCAAGGACGTGGTCTGCCAGGGCGTGAAGGCCGGCTCCGTCGCGGCCTGCAACTGA
PROTEIN sequence
Length: 320
VIGVSWSNFQEERWKTDEAAMKAAIEAAGDKYISADAQSNPGKQLTDVESLIGQGANALIILAQDASAIGPAVEKAVAEGIPVVGYDRLIENKDAFYLTFDNVEVGRMQARGVFAVKPEGNYVFIKGNGADPNANFLFQGQMEVLKGAVDAGKIKNVGEAYTDGWLPANAQRNMEQFLTANNNKVDAVVASNDGTAGGAIAALAAQGLAGSVPVSGQDGDHAALNRIALGTQTVSVWKDARALGKAAAEIASALAGGTAMDKIPNATKFKTPGGLEMNTVLLAPVPITKDNLNVVIDAGWVSKDVVCQGVKAGSVAACN*