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SCNpilot_expt_1000_bf_scaffold_2960_2

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 505..2112

Top 3 Functional Annotations

Value Algorithm Source
AMP-dependent synthetase and ligase; K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 528.0
  • Bit_score: 379
  • Evalue 2.20e-102
dicarboxylate-CoA ligase PimA n=1 Tax=Rhodococcus opacus RepID=UPI00029CB332 similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 517.0
  • Bit_score: 439
  • Evalue 5.70e-120
  • rbh
Plasmid 9, complete sequence {ECO:0000313|EMBL:AHK36177.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 517.0
  • Bit_score: 439
  • Evalue 8.00e-120

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1608
GTGACAACTGAGTCCATCCTGTCCTCGTCGCGATCCCACCCCGCGATGCTGCCCGCCATGCTCGCCCGGCGGGCCGAGCGCTCTCCCGACGACACCTGCATCATCGAGGCCGAGACGGGCGGGCGCGTCACCTATCGCGAGCTGGCCGACGATGCCGAGCGCGTGGCCCGCGGCCTGAAGGCGCTCGGGGTGCGCGCCGGCGACACCGTCGCGACGATGCTGCCGCACGCGATCGATACCTATCGCATCTGGTTCGGGCTCGCCCGGCTCGGCGCCCTCGAAGTGCCGATCGGGACGCGCTACCGCGGCCGCATGCTCGAGCACATCCTCGACGATTCGGGCGCGAAATTGCTGGTCGTCGACCGCGAATACCTCGACGCGATCGCGCAGGTCCTCCGCGACAGGGACGTGGCGCATCTGAAGCGGGTGGTCGTCCGGGGCGGGAGCCGGGCCGTCGACCTGCCCGGCCATGTCGAGACGATGCCGCTCGGCGAGCTTGCGGCCGGACCCGGCGATGGTGCGGAGCAAGAGGCCGCGCGCGGCGAACCCGCCCCTCACGACCTCGCCATGGTGCTCTACACTTCCGGGACGACCGGCCCCTCGAAGGGCGTCCTGATCCCGTGGGGCCAGGTGCATGCGACGGTCACCGGCGTCTTCCCGGAAGGCACGCTGGAGCCGGGCAAGGTGCTCTACGGCCCGTTCCCGCCCAACCACATAGGCGGCCGTCTCTTCCCCGGCATGGGCATTCATTTCGGCGTGCCGGCCGTGATCCGCCATGCCTTCAGCGCATCGGCCTACTGGTCCGACGTCGCGACCTACGGGTGCACGACGACGGCGCTGGTTTCGGCGATGATCTCGATCCTGATGGCGGCGCCGCCCTCGGACGGCGACGGCGACAACCCGCTGCGCGACGTCTTGATGAACCCCGTTCCCGCCGACTACGGGCGCTTCCAGTCCCGCTTCGGGGTGCGCGTGTGCACGGACTTCAACATGACCGAGATCAGCATCCCGCTCCACAGCGGCTGGGTGATCGAGGACTGGCGAAGCTGCGGCCGGCTGCGTCCCGGGCCGCCCGGCTACGACATCCGCATCGTCGACGAGCACGACAACCCGGTCGGGCCGGGCGTCGTCGGCGAGCTCGTCTGCCGCACCGACACGCCGTGGGCGCTCAATGCCGGCTATCTCGGCCGGCCGGCCGAGACCGCCGCGGCGTGGCGCAACGGCTGGTTCCACACGGGCGACGCGTTCAGGGTCGACGAGAACGGGCTGTACTACTTCGTCGACCGGATCAAGGACGCGATAAGGCGGCGCGGCGAGAACATCTCCTCCTTCGAGATCGAGCAGGAGGTGCTGGCGCACCCCGACGTGGCCGAATGCGCCGCGATCGGCGTCCCCTCCGAGCTCGGCGAGGAGGACATCAAGGTCTTCGTCGTCGCCCGTCCGGGCGCGAGCCTCACCGCGGAAGCCGTCATCGCCTTCGTCCGCTCGAGAAGCGCCGACTTCATGGTCCCCCGCTTCGTCGAACTGATCCCCGAACTGCCCCGGACGGAAGCGACGCAGAAGGTCCGGAAGAACGAGCTGAGAGCCCGCCACGCGTCCGGGGCGTGA
PROTEIN sequence
Length: 536
VTTESILSSSRSHPAMLPAMLARRAERSPDDTCIIEAETGGRVTYRELADDAERVARGLKALGVRAGDTVATMLPHAIDTYRIWFGLARLGALEVPIGTRYRGRMLEHILDDSGAKLLVVDREYLDAIAQVLRDRDVAHLKRVVVRGGSRAVDLPGHVETMPLGELAAGPGDGAEQEAARGEPAPHDLAMVLYTSGTTGPSKGVLIPWGQVHATVTGVFPEGTLEPGKVLYGPFPPNHIGGRLFPGMGIHFGVPAVIRHAFSASAYWSDVATYGCTTTALVSAMISILMAAPPSDGDGDNPLRDVLMNPVPADYGRFQSRFGVRVCTDFNMTEISIPLHSGWVIEDWRSCGRLRPGPPGYDIRIVDEHDNPVGPGVVGELVCRTDTPWALNAGYLGRPAETAAAWRNGWFHTGDAFRVDENGLYYFVDRIKDAIRRRGENISSFEIEQEVLAHPDVAECAAIGVPSELGEEDIKVFVVARPGASLTAEAVIAFVRSRSADFMVPRFVELIPELPRTEATQKVRKNELRARHASGA*